Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0613
         (669 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   117   3e-28
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   5.0  
U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    23   6.6  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.7  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  117 bits (282), Expect = 3e-28
 Identities = 55/107 (51%), Positives = 70/107 (65%)
 Frame = +2

Query: 257 SIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPE 436
           ++   KDKFQ+NLDVQ F+PEEISVK  D  ++VEGKHEEK+D HGY+SR F RRY LP+
Sbjct: 7   AVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYMLPK 66

Query: 437 GCTAESVESRLSSDGVLSVIAPRKCRQQWRVNARFRSPKTGPVRKEV 577
           G     + S LSSDG+L++  PRK  +Q           TG   K+V
Sbjct: 67  GHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQV 113


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
 Frame = +2

Query: 299 VQHFAPEEISVKTADGYIVVEGKH---------EEKKDQHGYISRQFTRRYALPEGCTAE 451
           ++ + PEE +V  ++ + +V+G+          E + ++  Y S    +  +     ++ 
Sbjct: 68  IEKYCPEEYTVDPSNTFQLVQGRELTKPSRRVLEGQSERESYYSSSHYQSSSSSSSSSSF 127

Query: 452 SVESRLSSDGVLSV--IAPRKCRQQWRVNARFR 544
              S  S  G  S+  I+P++   + R+N  FR
Sbjct: 128 QQSSYESESGAGSIVQISPQRVSLKLRLNEAFR 160


>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 567 RTGPVLGDRNLAFTLHCWRHFLGAIT-DNTPSEDSRD 460
           RT P  G R     L   RH LGA+T D+   ++SRD
Sbjct: 10  RTRPARGVRREPAVLVLVRH-LGALTGDSKSQQESRD 45


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 395 YISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAP 502
           Y+S +F     +P+GC    +   L  + V +V+ P
Sbjct: 661 YLSEEFFCTSGVPQGCVLSPLLFSLFINDVCNVLPP 696


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,150
Number of Sequences: 2352
Number of extensions: 14886
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)