Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0612
         (409 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   1.5  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   6.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.1  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    20   8.1  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          20   8.1  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 16/65 (24%), Positives = 22/65 (33%)
 Frame = -3

Query: 365 RPVRCPKLGR*F*RKPVVVHEXSXQAPRSSTVPTPPVXXXXXXXXFRVIISQRGESGLIF 186
           +P  C K    F R+  +VH        +   P P V         R      G  G + 
Sbjct: 245 KPFECDKCRGRFRRRHHLVHHKCGGEEEAERAPAPAVRAAGDAAAARGAARADGAGGPL- 303

Query: 185 ENHRP 171
            +HRP
Sbjct: 304 HDHRP 308


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 259 RCSSTGFCCCSES 221
           RC+  G CC  +S
Sbjct: 103 RCAFDGICCSQDS 115


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 74  KIXKXKYSFHKIIF 115
           KI + KYS +K+IF
Sbjct: 294 KIGEIKYSVNKLIF 307


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
          transcription factor Zen2 protein.
          Length = 243

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 30 ENQKNRFKIFSNYM 71
          ENQ     +F+NYM
Sbjct: 8  ENQAGNAPVFNNYM 21


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 30 ENQKNRFKIFSNYM 71
          ENQ     +F+NYM
Sbjct: 28 ENQAGNAPVFNNYM 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,418
Number of Sequences: 336
Number of extensions: 1216
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)