Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0612
         (409 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_36537| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.8  
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)               27   7.8  

>SB_36537| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 291

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 397 WWLAEKXSRF*DLSDVPNWAGSFNGNRWW 311
           WW+ E       + D+PN  G F  ++WW
Sbjct: 104 WWIYETP-----MVDLPNTNGGFTKHQWW 127


>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
          Length = 1079

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 14/57 (24%), Positives = 26/57 (45%)
 Frame = +3

Query: 105 KLFLLSVRMHRSHXSKNQIXNMRPMILEDKTAFTSLTNDDSEQQQKPVEEHRRSGHR 275
           K+F +  +  + + + N    +  M + +K    S    D+E  + P + HRR  HR
Sbjct: 790 KIFEMDAKKEQENGNTNDEEELEDMSMAEKPGSQS----DNELNRPPQDRHRRHHHR 842


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,255,533
Number of Sequences: 59808
Number of extensions: 162086
Number of successful extensions: 326
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 326
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 740151420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)