Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0612
(409 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089695-1|AAL90433.1| 237|Drosophila melanogaster RH70210p pro... 29 3.1
AE014297-2629|AAF55638.2| 237|Drosophila melanogaster CG5835-PA... 29 3.1
L27469-1|AAA28743.1| 426|Drosophila melanogaster coracle protein. 27 9.5
L27468-1|AAA28742.1| 549|Drosophila melanogaster coracle protein. 27 9.5
L27467-1|AAB59187.1| 1698|Drosophila melanogaster cora protein. 27 9.5
BT024976-1|ABE01206.1| 703|Drosophila melanogaster IP14940p pro... 27 9.5
AY070992-1|AAL48614.1| 387|Drosophila melanogaster RE08339p pro... 27 9.5
AE013599-2841|AAM70846.1| 699|Drosophila melanogaster CG11949-P... 27 9.5
AE013599-2840|AAF57592.1| 1698|Drosophila melanogaster CG11949-P... 27 9.5
AE013599-2839|AAF57591.1| 889|Drosophila melanogaster CG11949-P... 27 9.5
AE013599-2838|AAF57593.1| 703|Drosophila melanogaster CG11949-P... 27 9.5
>AY089695-1|AAL90433.1| 237|Drosophila melanogaster RH70210p
protein.
Length = 237
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 174 PMILEDKTAFTSLTNDDSEQQQKPVEEHRRS 266
P+ ++KTA T+DDS+ + + E+ RRS
Sbjct: 53 PVAAKNKTAVVEDTSDDSDSEAESEEQQRRS 83
>AE014297-2629|AAF55638.2| 237|Drosophila melanogaster CG5835-PA
protein.
Length = 237
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 174 PMILEDKTAFTSLTNDDSEQQQKPVEEHRRS 266
P+ ++KTA T+DDS+ + + E+ RRS
Sbjct: 53 PVAAKNKTAVVEDTSDDSDSEAESEEQQRRS 83
>L27469-1|AAA28743.1| 426|Drosophila melanogaster coracle protein.
Length = 426
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 165 NMRPMILEDKTAFTSLTNDDSEQQQKPVEE 254
N + LE+KT T+ T+D ++QQQ+ V +
Sbjct: 274 NAKTEQLEEKTVATTRTHDPNKQQQRVVTQ 303
>L27468-1|AAA28742.1| 549|Drosophila melanogaster coracle protein.
Length = 549
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 165 NMRPMILEDKTAFTSLTNDDSEQQQKPVEE 254
N + LE+KT T+ T+D ++QQQ+ V +
Sbjct: 460 NAKTEQLEEKTVATTRTHDPNKQQQRVVTQ 489
>L27467-1|AAB59187.1| 1698|Drosophila melanogaster cora protein.
Length = 1698
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 165 NMRPMILEDKTAFTSLTNDDSEQQQKPVEE 254
N + LE+KT T+ T+D ++QQQ+ V +
Sbjct: 1512 NAKTEQLEEKTVATTRTHDPNKQQQRVVTQ 1541
>BT024976-1|ABE01206.1| 703|Drosophila melanogaster IP14940p
protein.
Length = 703
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 165 NMRPMILEDKTAFTSLTNDDSEQQQKPVEE 254
N + LE+KT T+ T+D ++QQQ+ V +
Sbjct: 551 NAKTEQLEEKTVATTRTHDPNKQQQRVVTQ 580
>AY070992-1|AAL48614.1| 387|Drosophila melanogaster RE08339p
protein.
Length = 387
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 165 NMRPMILEDKTAFTSLTNDDSEQQQKPVEE 254
N + LE+KT T+ T+D ++QQQ+ V +
Sbjct: 201 NAKTEQLEEKTVATTRTHDPNKQQQRVVTQ 230
>AE013599-2841|AAM70846.1| 699|Drosophila melanogaster CG11949-PD,
isoform D protein.
Length = 699
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 165 NMRPMILEDKTAFTSLTNDDSEQQQKPVEE 254
N + LE+KT T+ T+D ++QQQ+ V +
Sbjct: 513 NAKTEQLEEKTVATTRTHDPNKQQQRVVTQ 542
>AE013599-2840|AAF57592.1| 1698|Drosophila melanogaster CG11949-PA,
isoform A protein.
Length = 1698
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 165 NMRPMILEDKTAFTSLTNDDSEQQQKPVEE 254
N + LE+KT T+ T+D ++QQQ+ V +
Sbjct: 1512 NAKTEQLEEKTVATTRTHDPNKQQQRVVTQ 1541
>AE013599-2839|AAF57591.1| 889|Drosophila melanogaster CG11949-PB,
isoform B protein.
Length = 889
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 165 NMRPMILEDKTAFTSLTNDDSEQQQKPVEE 254
N + LE+KT T+ T+D ++QQQ+ V +
Sbjct: 737 NAKTEQLEEKTVATTRTHDPNKQQQRVVTQ 766
>AE013599-2838|AAF57593.1| 703|Drosophila melanogaster CG11949-PC,
isoform C protein.
Length = 703
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 165 NMRPMILEDKTAFTSLTNDDSEQQQKPVEE 254
N + LE+KT T+ T+D ++QQQ+ V +
Sbjct: 551 NAKTEQLEEKTVATTRTHDPNKQQQRVVTQ 580
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,022,669
Number of Sequences: 53049
Number of extensions: 237157
Number of successful extensions: 771
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -