Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0608
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   3.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   3.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   3.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   5.7  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   5.7  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 331 LFKSSSYLSNEIWQNSNCSSWVLN 260
           L+ +++YL      N NC+ W +N
Sbjct: 156 LYHTTAYLHIITMINMNCALWYIN 179


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 331 LFKSSSYLSNEIWQNSNCSSWVLN 260
           L+ +++YL      N NC+ W +N
Sbjct: 156 LYHTTAYLHIITMINMNCALWYIN 179


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 331 LFKSSSYLSNEIWQNSNCSSWVLN 260
           L+ +++YL      N NC+ W +N
Sbjct: 156 LYHTTAYLHIITMINMNCALWYIN 179


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 445 RARNLVSFTGDREDYI 492
           R   ++SF+G+R D++
Sbjct: 381 RVNTIISFSGERYDFV 396


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 445 RARNLVSFTGDREDYI 492
           R   ++SF+G+R D++
Sbjct: 381 RVNTIISFSGERYDFV 396


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 576 AVCKNYCADSMLWPVLQNIK 517
           A C   C++  +WP   +IK
Sbjct: 66  ATCNMLCSEPAIWPKPVHIK 85


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 360 RNEKLFFSLLDCDIEK 407
           +NE+L  S +DC +EK
Sbjct: 40  KNERLLKSYVDCLLEK 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,826
Number of Sequences: 336
Number of extensions: 2644
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)