Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0608
         (578 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    25   2.3  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   7.2  
AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.    23   7.2  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   9.5  

>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 250 LAPNLKPRKNSWSSAKFH 303
           L+P+L P +N WS+ K H
Sbjct: 191 LSPDLNPIENLWSTLKRH 208


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 208 LHARRAQALGIHGLLAPNLKP 270
           LHAR   A G  G LAP L P
Sbjct: 433 LHARYGPARGRAGPLAPYLTP 453


>AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = +2

Query: 17  TFFKSFLTFIFERTKFKRNIINGLQPKYLDQRRNMHEIT 133
           +F+ SF     +  ++    +   +PKYLD  + + + T
Sbjct: 99  SFYASFSYNCHDHDQYSMECLEAAEPKYLDGLKTLADET 137


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 250 LAPNLKPRKNSWSSAK 297
           L+P+L P +N WS+ K
Sbjct: 263 LSPDLNPIENLWSTLK 278


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,635
Number of Sequences: 2352
Number of extensions: 9729
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)