Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0606
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0) 51 5e-07
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 46 2e-05
SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05
SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45) 43 1e-04
SB_33725| Best HMM Match : Kelch_1 (HMM E-Value=3.59994e-42) 43 1e-04
SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37) 42 2e-04
SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0) 41 7e-04
SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 9e-04
SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0) 40 0.002
SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0) 39 0.002
SB_38405| Best HMM Match : BACK (HMM E-Value=0) 39 0.003
SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_18403| Best HMM Match : BACK (HMM E-Value=0) 39 0.003
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 38 0.005
SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0) 38 0.006
SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0) 37 0.008
SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42) 36 0.014
SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0) 36 0.014
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 36 0.014
SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23) 36 0.025
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 36 0.025
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 35 0.032
SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38) 35 0.032
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.032
SB_54052| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.099
SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.099
SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13) 33 0.13
SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18) 33 0.17
SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30) 33 0.17
SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30) 32 0.30
SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36) 31 0.53
SB_25029| Best HMM Match : Collagen (HMM E-Value=0.38) 29 1.6
SB_56853| Best HMM Match : BTB (HMM E-Value=1.1e-16) 29 2.8
SB_40853| Best HMM Match : BTB (HMM E-Value=1.4e-17) 28 3.7
SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_42347| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 645
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFXMN--PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I+ H++VLS CS YF MF N ++ ++++K + +AL+ L+ F Y G+ + QE +
Sbjct: 43 ISAHRVVLSACSAYFDAMFTGNLLESKKQVIYIKGIDETALQLLVDFAYTGKAEITQENV 102
Query: 422 ASFISTAEQL 451
+ A L
Sbjct: 103 QLLLPAANML 112
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I H++VL+ CSPYF+ MF M ++ + ++DV SA+ L+ F Y + +++ +
Sbjct: 70 IHAHRVVLAACSPYFRAMFTREMAESRQAEITIRDVDESAMNLLITFAYTASITIEETNV 129
Query: 422 ASFISTA 442
+ + A
Sbjct: 130 QTLLPAA 136
>SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQEMFX--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
A H+ VL+ CS YF MF + ++ I+ +KD+ ++ L++F Y G V + E +
Sbjct: 24 AGHRAVLASCSAYFYAMFNGELAESKQKIITMKDILPDYMQVLVEFAYTGRVEITVENVQ 83
Query: 425 SFISTAEQL 451
+ ++TA L
Sbjct: 84 NLLATASLL 92
>SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFXMN---PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 418
I +HKLVL+ SPYF+ MF N TQ I L D+ AL+ ++++ Y G++ + ++
Sbjct: 44 IPSHKLVLAASSPYFRAMFTSNLLECTQRTIT-LYDIDVGALQQIVEYFYTGKITIDEDN 102
Query: 419 L 421
+
Sbjct: 103 V 103
>SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 43.6 bits (98), Expect = 9e-05
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFXMN-PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
I HK VLS+ S F MF TQ V L DV SA LL+F+Y EV + E +
Sbjct: 1624 IPAHKFVLSIGSAVFDAMFNGGIATQSDEVELPDVEPSAFMALLRFLYTDEVQIGPETVM 1683
Query: 425 SFISTAEQLPV 457
+ + TA++ +
Sbjct: 1684 TTLYTAKKYAI 1694
>SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45)
Length = 554
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I HKLVLS S YF+ MF M +Q + ++ + ++ L++F Y V + E +
Sbjct: 38 IDAHKLVLSASSEYFRAMFLTDMKESQQKFITIRAIDSQSMTTLVEFAYTSNVRINSENV 97
Query: 422 ASFISTAEQL 451
+ + A L
Sbjct: 98 ETLLYAASML 107
>SB_33725| Best HMM Match : Kelch_1 (HMM E-Value=3.59994e-42)
Length = 635
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQEMF--XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
+ H+LVL+ SP+F +F M Q + LK V S + ++L+++Y G+ ++ E
Sbjct: 46 SAHRLVLAAGSPFFHGLFTTEMKEKQENKIVLKQVKASVMENVLEYLYTGKTSLNPENAE 105
Query: 425 SFISTAEQLPVKG 463
+ +A ++G
Sbjct: 106 DLVVSASYFLIEG 118
>SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37)
Length = 521
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFX--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
HK+V+S SPYF+ +F + + V ++ + LL F+Y G +NV +E +
Sbjct: 48 HKIVVSASSPYFEVLFSGGLRESYLDTVTIQGIDSETFSALLDFIYTGVINVNEENVQQL 107
Query: 431 ISTAEQL 451
+ A+ L
Sbjct: 108 LPAAKML 114
>SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I HKLVL+ S YF MF M T V L D+ +A++ L+ + Y E+ ++ + +
Sbjct: 45 IRAHKLVLASFSDYFSAMFTGDMAETSQNTVHLTDMDPAAVQALISYSYTSEIEIRVDNV 104
Query: 422 ASFISTA 442
+ +S A
Sbjct: 105 ENLLSVA 111
>SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 587
Score = 40.7 bits (91), Expect = 7e-04
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFX--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
H++VL+ S YF +F M P V L+++ S + +L ++Y GE+ V +
Sbjct: 44 HRIVLAASSKYFYGLFTSEMIEKNAPSVKLQELRASVMNHILTYLYTGEITVTELNAEDL 103
Query: 431 ISTAEQLPVKG*PVIKMKKVPRH 499
I++A L + I K + RH
Sbjct: 104 IASANYLLIPRLKGIACKYLERH 126
>SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 40.3 bits (90), Expect = 9e-04
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I +H+L+L+ S YF MF M+ T + LK+V + +R L+++ Y + + + +
Sbjct: 47 IPSHRLILAANSSYFYSMFTSGMSETAQNRINLKEVDATVVRQLIEYCYTSTIEINENNV 106
Query: 422 ASFISTAEQL 451
+ +S L
Sbjct: 107 QNLLSIGNLL 116
>SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 625
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I H++VL+ CS YF MF M + ++ ++ +S ++ L+ FMY ++ + + +
Sbjct: 45 IRCHRVVLASCSAYFHSMFTNSMLESSQEVITIQGLSEKSVIQLINFMYTRKITITIDNI 104
Query: 422 ASFISTA 442
S ++ +
Sbjct: 105 ESLLTAS 111
>SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 481
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I H+LVL+ S YFQ MF + + V L+DV A+ L+ F Y G++++ E +
Sbjct: 58 IVAHRLVLASFSSYFQAMFTGGLVESFEDSVTLRDVDSGAVELLVDFAYTGKLDITTENV 117
Query: 422 ASFI 433
S +
Sbjct: 118 QSIM 121
>SB_38405| Best HMM Match : BACK (HMM E-Value=0)
Length = 423
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I H+LVL+ CS YF MF + ++ + L+ + A+ L++F Y + V ++ +
Sbjct: 53 IYAHRLVLAACSQYFHAMFTSELLESRQKEISLQGLQPDAMELLVEFAYTARIQVSEDNV 112
Query: 422 ASFISTAEQLPVK 460
+ + A L ++
Sbjct: 113 QALLPAASLLQLE 125
>SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFXMN--PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
IA H+ VL+ SPYF+ MF N + + LK ++ AL+ LL ++Y + + + +
Sbjct: 94 IAVHRNVLAAVSPYFRAMFTGNLLESGKNRILLKGIAGVALQALLDYVYTSSIEIFDDNV 153
Query: 422 ASFISTA 442
++ A
Sbjct: 154 EEVLNAA 160
>SB_18403| Best HMM Match : BACK (HMM E-Value=0)
Length = 423
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I H+LVL+ CS YF MF + ++ + L+ + A+ L++F Y + V ++ +
Sbjct: 53 IYAHRLVLAACSQYFHAMFTSELLESRQKEISLQGLQPDAMELLVEFAYTARIQVSEDNV 112
Query: 422 ASFISTAEQLPVK 460
+ + A L ++
Sbjct: 113 QALLPAASLLQLE 125
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFXMNPTQH-PIVFLKDVSHSALRDLLQFMYQGEV 400
HK VLSV SP F+ MF N + P V L D + ++LL+++Y +V
Sbjct: 46 HKFVLSVSSPVFEAMFFGNLAESGPTVRLPDCTVDGFQELLRYLYCDQV 94
>SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQEMFX--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
A HK VL S +F +F M Q V LK + + DLL ++Y G++ V +
Sbjct: 33 AAHKNVLCASSIFFNGLFSSSMRERQENTVNLKQFPVNIMEDLLTYLYTGKLEVTEATAQ 92
Query: 425 SFISTAEQL 451
F++ A+ L
Sbjct: 93 DFLAAADFL 101
>SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 595
Score = 37.1 bits (82), Expect = 0.008
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFXMN-PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
HK +L+ S YF MF + T V +++++ +A+ LL F+YQG++ + +E +
Sbjct: 48 HKNILAASSDYFMAMFSGHMATVDRTVVVQEITSTAMEVLLAFIYQGKLLITEENV 103
>SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42)
Length = 603
Score = 36.3 bits (80), Expect = 0.014
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQEMFX--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
A H+ VL+ S +F MF M + + L ++ AL +L F Y E+N+ ++ +
Sbjct: 64 AAHRCVLAANSQFFYTMFTSGMRDSNDSRIKLCSLTSGALSSILDFFYTREINISRDNVV 123
Query: 425 SFISTAEQL---PVK 460
+ A L PVK
Sbjct: 124 DILEAASFLLLTPVK 138
>SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 36.3 bits (80), Expect = 0.014
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFX--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
H+ +L+ SPYF+ +F M Q + L +V + D+L ++Y G V V++ +
Sbjct: 40 HRNILAASSPYFRALFTSEMRENQGNEIKLNNVDVEIMEDILAYLYSGSVVVEESKAIPL 99
Query: 431 ISTAEQL 451
A+ +
Sbjct: 100 TVAADYM 106
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 36.3 bits (80), Expect = 0.014
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFX--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
H+ +LS S YF MF M + +V + V+ ++R +L F+Y GE+ + + +
Sbjct: 48 HRNILSASSDYFFAMFNGNMKESSQDVVTITGVTPDSMRSILNFIYTGEIVLDWDNVELI 107
Query: 431 ISTAEQLPVK 460
+ A + V+
Sbjct: 108 LQGANLMLVQ 117
>SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23)
Length = 417
Score = 35.5 bits (78), Expect = 0.025
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 239 KXCIATHKLVLSVCSPYFQEMFXMNPTQHP-IVFLKDVSHSALRDLLQFMYQGEVNVKQE 415
K I H+ VLSV SP F+ MF + + L D AL ++L++ Y EV +
Sbjct: 40 KISIPAHRYVLSVSSPVFEAMFHGAMAESSREISLPDCYAEALSEMLRYAYYDEVKLTGS 99
Query: 416 ELASFISTAEQLPVKG 463
+ + AE+ G
Sbjct: 100 NAMAVMYLAEKYNFPG 115
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 35.5 bits (78), Expect = 0.025
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFX--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ 412
H+ +L+ SPYF+ +F M Q + L +V + D+L ++Y G V V++
Sbjct: 1409 HRNILAASSPYFRALFTSEMRENQGNEIKLNNVDVEIMEDILAYLYSGSVVVEE 1462
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 35.1 bits (77), Expect = 0.032
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 239 KXCIATHKLVLSVCSPYFQEMFXMN-PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQE 415
K I HKL+L++ SP F MF + Q + + D + +LL++ Y E + +E
Sbjct: 2773 KYFIPGHKLILAISSPVFYAMFYGSMAEQKAEITVADSDADSFMELLRYAYFDEATINEE 2832
Query: 416 ELASFISTAEQ 448
+ + A++
Sbjct: 2833 NVLGVLYLAKK 2843
>SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38)
Length = 518
Score = 35.1 bits (77), Expect = 0.032
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFXMN--PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I H++VL+ CSPYF+ M T + L + ++ ++++ Y + + +E +
Sbjct: 50 IKAHRVVLAACSPYFRAMLTTGFAETFMSTIPLHECDPVGVQSIVEYFYSKRLTITKENI 109
Query: 422 ASFISTA 442
+S A
Sbjct: 110 EGLLSAA 116
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 35.1 bits (77), Expect = 0.032
Identities = 23/113 (20%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +2
Query: 119 LSWRRTNNFHYAGTISTQICQ-RAFMACCRVEIS*T*RWLPKXCIATHKLVLSVCSPYFQ 295
+ ++ ++ Y ++++Q+ Q + + C + + T + HK+VL+ S YF+
Sbjct: 1 MDYQNIDDVEYRKSVTSQLMQYQESESMCDITLKTT----SEDIFPAHKIVLAAKSDYFK 56
Query: 296 EMFXMNPTQHPIVFLK-DVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 451
+F + + D+S L+ +L+++Y G+V++ S A+ L
Sbjct: 57 ALFTTEMAEKNCQEISLDISTRTLKAILKYVYCGDVSLNVSNARSVFVAADYL 109
>SB_54052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 34.7 bits (76), Expect = 0.043
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMF--XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
HK VL SP+F+ +F M + L+ +S +++ FMY G + V++E
Sbjct: 49 HKNVLCAASPFFRGLFTNDMQEKNQEHIELQVISGDVGEEVISFMYTGAIKVEKENAQDI 108
Query: 431 ISTAEQL 451
+ + L
Sbjct: 109 VMAGDFL 115
>SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 33.5 bits (73), Expect = 0.099
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMF--XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 406
H++VL+ CS YF MF M +Q ++ L+ ++ + LL F+Y V +
Sbjct: 52 HRIVLASCSDYFYAMFTNDMLESQKGVIELQGLASDTMEVLLDFVYTETVKL 103
>SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 33.5 bits (73), Expect = 0.099
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 KXCIATHKLVLSVCSPYFQEMFXMNPTQHPI-VFLKDVSHSALRDLLQFMYQGEV 400
K I HK VL+ SP F+ MF + + L D S + ++L+F+Y E+
Sbjct: 38 KVSIPAHKYVLATSSPVFEAMFFGKLAETGFTIALPDCSAEGMLEMLRFIYTEEI 92
>SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13)
Length = 133
Score = 33.1 bits (72), Expect = 0.13
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 239 KXCIATHKLVLSVCSPYFQEMF--XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 400
K I HK VL+ SP F+ MF + T I L D + + ++L+++Y+ EV
Sbjct: 7 KVSIPAHKYVLATSSPVFEAMFFGKLAETSRNIT-LPDCFYEGVLEMLRYLYRDEV 61
>SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18)
Length = 123
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF---XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 418
++ H++VL+ SPYF+E+ + V + A+ +L+F Y G + + +
Sbjct: 52 LSAHRVVLAALSPYFRELLLPTNNEKAEKEYVMPDSLKPGAVVAMLEFFYSGTLQINLKS 111
Query: 419 LASFISTAEQL 451
+ ++ A +
Sbjct: 112 IEDLLAAASTM 122
>SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30)
Length = 176
Score = 32.7 bits (71), Expect = 0.17
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMF---XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 427
HKLVL+ S YF+ MF + +++ +V L D+ + ++ + Y ++ + + +
Sbjct: 47 HKLVLAANSTYFRAMFGEGFVESSKNDVV-LHDLDPKGVNAVISYFYNSKIEINADNFGA 105
Query: 428 FISTAEQLPVK 460
+ A VK
Sbjct: 106 VFAVANMWDVK 116
>SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30)
Length = 619
Score = 31.9 bits (69), Expect = 0.30
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFXMN----PTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
HKLVL+ S YF+ MF + + V L D+ + ++ + Y ++ + +
Sbjct: 89 HKLVLAANSTYFRAMFGLREGFVESSKNDVVLHDLDPKGVNAVISYFYNSKIEINADNFE 148
Query: 425 SFISTAEQLPVK 460
+ + A VK
Sbjct: 149 AVFAVANMWDVK 160
>SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36)
Length = 398
Score = 31.1 bits (67), Expect = 0.53
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMF--XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
HK +L+ SP F MF M ++ V + D+ +++L+F+Y G Q
Sbjct: 237 HKAILAARSPVFSAMFEHEMEESRKGRVEILDIDPDVFQEMLKFVYTGNTPQIQGMADDL 296
Query: 431 ISTAEQ 448
++ A++
Sbjct: 297 LAAADK 302
>SB_25029| Best HMM Match : Collagen (HMM E-Value=0.38)
Length = 388
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 227 RWLPKXCIATHKLVLSVCSPYFQEMFXMNPTQHPIVFLKD 346
RW + I+T ++ +CSP + +M M P + P FL +
Sbjct: 286 RWAQQQ-ISTSSKIIVLCSPKYLKMCQMRPKEDPKAFLTE 324
>SB_56853| Best HMM Match : BTB (HMM E-Value=1.1e-16)
Length = 605
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF-XMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQE 415
I HK +L V SP F MF T V L D L + L+++Y V E
Sbjct: 47 IPAHKYILGVSSPVFFAMFYGQMSTSISKVELPDCDSVGLIEFLRYLYCNRVKFTME 103
>SB_40853| Best HMM Match : BTB (HMM E-Value=1.4e-17)
Length = 259
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFXMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFIS 436
HK LS+ SP F++MF Q + L ++++L +Y V +E ++
Sbjct: 31 HKSTLSMWSPVFEKMFRERNDQE--ICLPGKKSKEIKEMLLVIYPTSKKVTEENCYYLLT 88
Query: 437 TAEQ 448
A++
Sbjct: 89 LAQE 92
>SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/55 (25%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFXMNPTQHPIVFLKDVSH---SALRDLLQFMYQGEVN 403
I HK+VL+ SPYF+ +F + + + ++ S+ A+ +++ ++Y G+++
Sbjct: 59 IPCHKVVLAARSPYFRHLFINSESGQYVKNVELPSYFSILAVDEVINYLYSGKLH 113
>SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 124 MASDEQFSLCWNNFHANMSAGFHGL 198
M S E WN F N++AG+H L
Sbjct: 203 MMSYEGMQFDWNTFSVNLTAGYHQL 227
>SB_42347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -3
Query: 278 ILIELIYVLQYXXSAANVTSTRSPRDSRP*KPADIFAWKLFQHSENCSSDAMIATTRR 105
IL E + + +A N T R P+D P A +F FQ+S ++ ++ R
Sbjct: 19 ILQEACLLALHPRTAVNRTELREPQDPSPTSAAAMFHSSKFQYSIKSTNGKILTDLER 76
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,870,894
Number of Sequences: 59808
Number of extensions: 260282
Number of successful extensions: 572
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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