Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0606
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical pr... 41 6e-04
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 39 0.002
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 38 0.005
AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical ... 34 0.050
Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical pr... 34 0.066
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 33 0.087
L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical pr... 31 0.35
U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein. 31 0.35
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 31 0.46
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 31 0.46
AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cel... 31 0.61
AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein. 31 0.61
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 29 1.4
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 29 1.4
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 29 1.4
U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical pr... 27 7.6
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 27 7.6
AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical ... 27 7.6
U23454-6|AAC46521.1| 192|Caenorhabditis elegans Hypothetical pr... 27 10.0
>Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical
protein F38H4.7 protein.
Length = 602
Score = 40.7 bits (91), Expect = 6e-04
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMF--XMNP--TQHPI-VFLKDVSHSALRDLLQFMYQGEVNVKQ 412
I HK VLS+ S F MF + P T+ + + L DV SA LL+F+Y EV ++
Sbjct: 204 IPAHKFVLSIGSVVFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKIEA 263
Query: 413 EELASFISTAEQLPV 457
E + + + TA++ V
Sbjct: 264 ESVMTTLYTAKKYAV 278
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFXMNPTQHPI--VFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
I H++VLS CSPYF MF + + + ++++ L L++F Y G + + +
Sbjct: 67 INAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTLEALIEFCYTGAIAIDDSNV 126
Query: 422 ASFISTA 442
+ A
Sbjct: 127 QDILPAA 133
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/64 (25%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFXMNPTQHPI--VFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
++ HK++L+ PYF+ MF ++ + + + ++D+++ + LL F Y GE+ + +
Sbjct: 62 LSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYETVDALLSFAYTGELRITTSNV 121
Query: 422 ASFI 433
S +
Sbjct: 122 QSIM 125
>AL032663-3|CAA21761.1| 320|Caenorhabditis elegans Hypothetical
protein Y75B12B.4 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.050
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 260 KLVLSVCSPYFQEMFXMNPTQHPIVFLK--DVSHSALRDLLQFMYQGEVNVKQEELASFI 433
K VL+ S +FQ+MF N + +K DV+HS DLL +Y + + ++ +
Sbjct: 175 KQVLATSSQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLNVIYPTHMLINSSNVSHLL 234
Query: 434 STAEQLPV 457
+++ V
Sbjct: 235 KLSDRFAV 242
>Z68216-4|CAA92463.2| 565|Caenorhabditis elegans Hypothetical
protein F27C8.5 protein.
Length = 565
Score = 33.9 bits (74), Expect = 0.066
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +2
Query: 257 HKLVLSVCSPYFQEMFXMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFIS 436
H +V+ S F E F + + D ++R + +MY GE+++ + +A ++
Sbjct: 49 HSVVICAHSDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGEIDIPETTIADVLA 108
Query: 437 TAEQLPV 457
A L V
Sbjct: 109 VASYLRV 115
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 33.5 bits (73), Expect = 0.087
Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFXMNPTQHPIVFL----KDVSHSALRDLLQFMYQGEVNVKQE 415
++ HK++L+ PYF+ MF ++ + + + D+++ + LL F Y GE+ +
Sbjct: 62 LSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMNYETVDALLSFAYTGELRITTS 121
Query: 416 ELASFI 433
+ S +
Sbjct: 122 NVQSIM 127
>L14433-2|AAA27978.1| 410|Caenorhabditis elegans Hypothetical
protein C50C3.8 protein.
Length = 410
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFX---MNPTQHPIVFLKDVSHSALRDLLQFMYQG 394
I H+ +L SP F+ MF M Q + ++D + ++R +++FMY G
Sbjct: 230 IKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMYTG 281
>Z79759-4|CAB02139.2| 395|Caenorhabditis elegans Hypothetical
protein ZK858.4 protein.
Length = 395
Score = 31.5 bits (68), Expect = 0.35
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFXMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 418
I HK VL+ SP F M T + ++++ D+ + + +++ ++Y G N +
Sbjct: 212 IRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITD 271
Query: 419 LASFISTA 442
+A+ + A
Sbjct: 272 MATALLIA 279
>U67737-1|AAC63596.1| 395|Caenorhabditis elegans MEL-26 protein.
Length = 395
Score = 31.5 bits (68), Expect = 0.35
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFXMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 418
I HK VL+ SP F M T + ++++ D+ + + +++ ++Y G N +
Sbjct: 212 IRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITD 271
Query: 419 LASFISTA 442
+A+ + A
Sbjct: 272 MATALLIA 279
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 31.1 bits (67), Expect = 0.46
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFXMNPT--QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
+ HK +L+ SP F M + Q+ L+D+ + ++ +L ++Y G
Sbjct: 214 LKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRDIDYEVVQAILYYIYTGTCTNMGGNA 273
Query: 422 ASFISTAEQLPVKG 463
++ AE+ + G
Sbjct: 274 LDILAAAERFALPG 287
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 31.1 bits (67), Expect = 0.46
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 248 IATHKLVLSVCSPYFQEMFXMNPT--QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
+ HK +L+ SP F M + Q+ L+D+ + ++ +L ++Y G
Sbjct: 221 LKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRDIDYEVVQAILYYIYTGTCTNMGGNA 280
Query: 422 ASFISTAEQLPVKG 463
++ AE+ + G
Sbjct: 281 LDILAAAERFALPG 294
>AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cell
migration protein 30 protein.
Length = 787
Score = 30.7 bits (66), Expect = 0.61
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 230 WLPKXCIATHKLVLSVCSPYFQEM 301
W+ K C THKLV VC YF +
Sbjct: 299 WIEKTCAVTHKLVAEVCE-YFDNL 321
>AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein.
Length = 787
Score = 30.7 bits (66), Expect = 0.61
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 230 WLPKXCIATHKLVLSVCSPYFQEM 301
W+ K C THKLV VC YF +
Sbjct: 299 WIEKTCAVTHKLVAEVCE-YFDNL 321
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQEMFXMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
A H+ +L+ SPYF +F + + S L +MY G V + + ++
Sbjct: 54 AAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSEL 113
Query: 431 ISTA 442
+ A
Sbjct: 114 LRFA 117
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQEMFXMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
A H+ +L+ SPYF +F + + S L +MY G V + + ++
Sbjct: 54 AAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSEL 113
Query: 431 ISTA 442
+ A
Sbjct: 114 LRFA 117
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +2
Query: 251 ATHKLVLSVCSPYFQEMFXMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
A H+ +L+ SPYF +F + + S L +MY G V + + ++
Sbjct: 54 AAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSEL 113
Query: 431 ISTA 442
+ A
Sbjct: 114 LRFA 117
>U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical
protein ZC239.6 protein.
Length = 258
Score = 27.1 bits (57), Expect = 7.6
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +2
Query: 254 THKLVLSVCSPYFQ---EMFXMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
T K L+ YF+ E+ +NPT PI + H +L FM G+V++ QE L
Sbjct: 13 TSKATLTKFDGYFKNLPEIQQVNPTS-PIFVDRSPKH--FETILNFMRDGDVDLPQEYLN 69
Query: 425 SFISTA 442
+ A
Sbjct: 70 QLLREA 75
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 218 TRSPRDSRP*KPADIFAWKLFQHSENCSSDAM 123
TRSP+ +P KP ++ FQ+S + SS A+
Sbjct: 1362 TRSPQVQKPIKPTASRSFTSFQNSPSTSSSAL 1393
>AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical
protein F52G3.3 protein.
Length = 807
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 245 CIATHKLVLSVCSPYFQEMFXMNPTQHPIVFLKDVSHSAL 364
C++ H L L++ +F ++F N HP++F+ HS L
Sbjct: 376 CVSHHHLSLNLKFFFFYKIFFPNSKFHPLLFV--FQHSIL 413
>U23454-6|AAC46521.1| 192|Caenorhabditis elegans Hypothetical
protein C10A4.7 protein.
Length = 192
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 148 LCWNNFHANMSAGFHGLLSRGDLVDVTL 231
LCW + +AN++A F LL+ G + T+
Sbjct: 129 LCWEDENANVAAAFILLLASGTITFFTM 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,512,950
Number of Sequences: 27780
Number of extensions: 202129
Number of successful extensions: 385
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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