Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0605
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77660-9|CAB01179.1|  602|Caenorhabditis elegans Hypothetical pr...    42   4e-04
AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    42   4e-04
Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    39   0.003
Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical pr...    35   0.038
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    35   0.051
L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical pr...    34   0.067
AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical ...    34   0.088
U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical pr...    33   0.12 
U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical pr...    33   0.12 
AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.      32   0.27 
AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.      32   0.27 
AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1 suppres...    32   0.27 
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    31   0.47 
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       31   0.47 
U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical pr...    28   4.4  
U80842-9|AAB37945.2|  258|Caenorhabditis elegans Hypothetical pr...    28   5.8  

>Z77660-9|CAB01179.1|  602|Caenorhabditis elegans Hypothetical
           protein F38H4.7 protein.
          Length = 602

 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFK--MNP--TQHPI-VFLKDVSHSALRDLLQFMYQGEVNVKQ 412
           I  HK VLS+ S  F  MF   + P  T+  + + L DV  SA   LL+F+Y  EV ++ 
Sbjct: 204 IPAHKFVLSIGSVVFDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKIEA 263

Query: 413 EELASFISTAEQLQVKGL 466
           E + + + TA++  V  +
Sbjct: 264 ESVMTTLYTAKKYAVPAM 281


>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
           I  H++VLS CSPYF  MF  +M       + ++++    L  L++F Y G + +    +
Sbjct: 67  INAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTLEALIEFCYTGAIAIDDSNV 126

Query: 422 ASFISTAEQLQV 457
              +  A  LQ+
Sbjct: 127 QDILPAACLLQI 138


>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
           ++ HK++L+   PYF+ MF ++  +  +  + ++D+++  +  LL F Y GE+ +    +
Sbjct: 62  LSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDMNYETVDALLSFAYTGELRITTSNV 121

Query: 422 ASFISTAEQLQV 457
            S +  A   Q+
Sbjct: 122 QSIMLGANFFQM 133


>Z68216-4|CAA92463.2|  565|Caenorhabditis elegans Hypothetical
           protein F27C8.5 protein.
          Length = 565

 Score = 35.1 bits (77), Expect = 0.038
 Identities = 16/67 (23%), Positives = 32/67 (47%)
 Frame = +2

Query: 257 HKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFIS 436
           H +V+   S  F E F      +    + D    ++R +  +MY GE+++ +  +A  ++
Sbjct: 49  HSVVICAHSDVFSETFDNQRAPYQPFNMTDFDPDSVRRVFDWMYSGEIDIPETTIADVLA 108

Query: 437 TAEQLQV 457
            A  L+V
Sbjct: 109 VASYLRV 115


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 34.7 bits (76), Expect = 0.051
 Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFKMNPTQHPIVFL----KDVSHSALRDLLQFMYQGEVNVKQE 415
           ++ HK++L+   PYF+ MF ++  +  +  +     D+++  +  LL F Y GE+ +   
Sbjct: 62  LSAHKVILAATIPYFRGMFTLDLMEANMKEINIEDSDMNYETVDALLSFAYTGELRITTS 121

Query: 416 ELASFISTAEQLQV 457
            + S +  A   Q+
Sbjct: 122 NVQSIMLGANFFQM 135


>L14433-2|AAA27978.1|  410|Caenorhabditis elegans Hypothetical
           protein C50C3.8 protein.
          Length = 410

 Score = 34.3 bits (75), Expect = 0.067
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFK---MNPTQHPIVFLKDVSHSALRDLLQFMYQG--EVNVKQ 412
           I  H+ +L   SP F+ MF    M   Q   + ++D  + ++R +++FMY G  E    Q
Sbjct: 230 IKAHRCILGQNSPVFKSMFSSPNMIEAQKGEIHIEDAKYDSVRAMVEFMYTGATESLESQ 289

Query: 413 EELASFISTAEQLQV 457
             +   ++ A++ +V
Sbjct: 290 GNIDEILAIADKYEV 304


>AL032663-3|CAA21761.1|  320|Caenorhabditis elegans Hypothetical
           protein Y75B12B.4 protein.
          Length = 320

 Score = 33.9 bits (74), Expect = 0.088
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +2

Query: 260 KLVLSVCSPYFQEMFKMNPTQHPIVFLK--DVSHSALRDLLQFMYQGEVNVKQEELASFI 433
           K VL+  S +FQ+MF  N  +     +K  DV+HS   DLL  +Y   + +    ++  +
Sbjct: 175 KQVLATSSQFFQKMFYSNFAEKTQAEIKIDDVTHSEFIDLLNVIYPTHMLINSSNVSHLL 234

Query: 434 STAEQLQV 457
             +++  V
Sbjct: 235 KLSDRFAV 242


>U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical
           protein C07D10.2a protein.
          Length = 390

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFKMNPT--QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
           +  HK +L+  SP F  M + +    Q+    L+D+ +  ++ +L ++Y G         
Sbjct: 214 LKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRDIDYEVVQAILYYIYTGTCTNMGGNA 273

Query: 422 ASFISTAEQLQVKGL 466
              ++ AE+  + GL
Sbjct: 274 LDILAAAERFALPGL 288


>U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical
           protein C07D10.2b protein.
          Length = 397

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFKMNPT--QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
           +  HK +L+  SP F  M + +    Q+    L+D+ +  ++ +L ++Y G         
Sbjct: 221 LKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRDIDYEVVQAILYYIYTGTCTNMGGNA 280

Query: 422 ASFISTAEQLQVKGL 466
              ++ AE+  + GL
Sbjct: 281 LDILAAAERFALPGL 295


>AF519108-1|AAM74222.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 16/69 (23%), Positives = 29/69 (42%)
 Frame = +2

Query: 251 ATHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
           A H+ +L+  SPYF  +FK        + +   S       L +MY G V + +  ++  
Sbjct: 54  AAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSEL 113

Query: 431 ISTAEQLQV 457
           +  A    +
Sbjct: 114 LRFANNFLI 122


>AF502568-1|AAM74151.1|  909|Caenorhabditis elegans EOR-1 protein.
          Length = 909

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 16/69 (23%), Positives = 29/69 (42%)
 Frame = +2

Query: 251 ATHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
           A H+ +L+  SPYF  +FK        + +   S       L +MY G V + +  ++  
Sbjct: 54  AAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSEL 113

Query: 431 ISTAEQLQV 457
           +  A    +
Sbjct: 114 LRFANNFLI 122


>AF100669-8|AAK39268.1|  909|Caenorhabditis elegans Egl-1
           suppressor/dio uptake defective/raf enhancer protein 1
           protein.
          Length = 909

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 16/69 (23%), Positives = 29/69 (42%)
 Frame = +2

Query: 251 ATHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
           A H+ +L+  SPYF  +FK        + +   S       L +MY G V + +  ++  
Sbjct: 54  AAHRNILAAHSPYFDAIFKYCKITKEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSEL 113

Query: 431 ISTAEQLQV 457
           +  A    +
Sbjct: 114 LRFANNFLI 122


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFKMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 418
           I  HK VL+  SP F  M     T   +  ++++ D+ +  + +++ ++Y G  N    +
Sbjct: 212 IRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITD 271

Query: 419 LASFISTA 442
           +A+ +  A
Sbjct: 272 MATALLIA 279


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFKMNPT---QHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 418
           I  HK VL+  SP F  M     T   +  ++++ D+ +  + +++ ++Y G  N    +
Sbjct: 212 IRAHKAVLAARSPVFNAMLTHQDTDEAKSSMMYINDMDYDVIYEMVYYIYCGRCNKDITD 271

Query: 419 LASFISTA 442
           +A+ +  A
Sbjct: 272 MATALLIA 279


>U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical
           protein T07F8.1 protein.
          Length = 822

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 392 GEVNVKQEELASFISTAEQLQVKGLTGNQ 478
           G    K EE+  +I  ++++  +GLTGNQ
Sbjct: 650 GPTKQKLEEVLDYIGCSQKINYQGLTGNQ 678


>U80842-9|AAB37945.2|  258|Caenorhabditis elegans Hypothetical
           protein ZC239.6 protein.
          Length = 258

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +2

Query: 254 THKLVLSVCSPYFQ---EMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 424
           T K  L+    YF+   E+ ++NPT  PI   +   H     +L FM  G+V++ QE L 
Sbjct: 13  TSKATLTKFDGYFKNLPEIQQVNPTS-PIFVDRSPKH--FETILNFMRDGDVDLPQEYLN 69

Query: 425 SFISTA 442
             +  A
Sbjct: 70  QLLREA 75


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,941,850
Number of Sequences: 27780
Number of extensions: 249008
Number of successful extensions: 591
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)