Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0605
         (598 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta...    44   1e-04
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta...    44   1e-04
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai...    40   0.001
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai...    40   0.001
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter...    40   0.002
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai...    33   0.14 
At2g47800.1 68415.m05966 glutathione-conjugate transporter (MRP4...    32   0.25 
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai...    31   0.77 
At5g48510.1 68418.m05998 speckle-type POZ protein-related contai...    29   3.1  
At4g04090.1 68417.m00578 speckle-type POZ protein-related contai...    29   3.1  
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr...    28   4.1  
At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ...    28   5.4  
At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger) fa...    27   7.2  
At2g40440.1 68415.m04990 BTB/POZ domain-containing protein conta...    27   9.5  

>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
           Pfam PF00651: BTB/POZ domain; contains Interpro
           IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
           (GI:1841872) [Dictyostelium discoideum]
          Length = 809

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
 Frame = +2

Query: 254 THKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVK 409
           +HK++LS+ S  F +MF   M+ +    ++L DVS  A + ++ FMY GE+N++
Sbjct: 366 SHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNME 419



 Score = 36.3 bits (80), Expect = 0.016
 Identities = 24/89 (26%), Positives = 41/89 (46%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 427
           +  HK++L          F +  +   ++ L+ VS+  L  LLQ++Y G   + + ELA 
Sbjct: 224 VPAHKVILQASGN-----FPLRSSDGDVIQLRGVSYPILHALLQYIYTGRTQILESELAP 278

Query: 428 FISTAEQLQVKGLTGNQNEESSTPSKPSR 514
               + + +V  L   Q EES    K S+
Sbjct: 279 LRDLSSKFEVMSLV-RQCEESIDHFKLSK 306


>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
           Pfam PF00651: BTB/POZ domain; contains Interpro
           IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
           (GI:1841872) [Dictyostelium discoideum]
          Length = 809

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
 Frame = +2

Query: 254 THKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVK 409
           +HK++LS+ S  F +MF   M+ +    ++L DVS  A + ++ FMY GE+N++
Sbjct: 366 SHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNME 419



 Score = 36.3 bits (80), Expect = 0.016
 Identities = 24/89 (26%), Positives = 41/89 (46%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 427
           +  HK++L          F +  +   ++ L+ VS+  L  LLQ++Y G   + + ELA 
Sbjct: 224 VPAHKVILQASGN-----FPLRSSDGDVIQLRGVSYPILHALLQYIYTGRTQILESELAP 278

Query: 428 FISTAEQLQVKGLTGNQNEESSTPSKPSR 514
               + + +V  L   Q EES    K S+
Sbjct: 279 LRDLSSKFEVMSLV-RQCEESIDHFKLSK 306


>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
           Pfam profile:PF00651 BTB/POZ domain; similar to
           Speckle-type POZ protein (SP:O43791) [Homo sapiens]
          Length = 207

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 418
           I THK VL+  S  F+ M    +   +    + L D+SH  L+ LL+F+Y G +     +
Sbjct: 37  IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96

Query: 419 LASFISTAEQLQVKGL 466
             S    A++  +  L
Sbjct: 97  YRSLYLAADKYDISYL 112


>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
           Pfam profile:PF00651 BTB/POZ domain; similar to
           Speckle-type POZ protein (SP:O43791) [Homo sapiens]
          Length = 207

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 418
           I THK VL+  S  F+ M    +   +    + L D+SH  L+ LL+F+Y G +     +
Sbjct: 37  IPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96

Query: 419 LASFISTAEQLQVKGL 466
             S    A++  +  L
Sbjct: 97  YRSLYLAADKYDISYL 112


>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
           IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
           protein (GI:17483747) [Mus musculus]
          Length = 243

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEEL 421
           I  HK VL   SP F+ M +  M  +    + + DVS+ ALR  + ++Y  E  + ++  
Sbjct: 80  IPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQMA 139

Query: 422 ASFISTAEQLQVKGL 466
              +  +E+ QVK L
Sbjct: 140 CDLLVMSEKYQVKHL 154


>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
           MATH domain; similar to Speckle-type POZ protein
           (SP:O43791) [Homo sapiens]
          Length = 410

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 257 HKLVLSVCSPYFQ-EMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQ 391
           HKLVL+  SP+F+ + F      +  V + D+     + LLQFMY+
Sbjct: 212 HKLVLAARSPFFKSKFFSEFEANNTEVTINDLEPKVFKALLQFMYK 257


>At2g47800.1 68415.m05966 glutathione-conjugate transporter (MRP4)
           identical to AtMRP4 GI:2959767 from [Arabidopsis
           thaliana]
          Length = 1516

 Score = 32.3 bits (70), Expect = 0.25
 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
 Frame = +2

Query: 359 ALRDLLQFMYQGEVNVKQEELASFIS---TAEQL--QVKGLTGNQNEESSTPSKPS 511
           A+  +  F+     +++ E++ASF S   TA  L   V+G+TG    E+++P+KPS
Sbjct: 183 AVTGIFHFLSDAATSLRAEDVASFFSFPLTAFLLIASVRGITGLVTAETNSPTKPS 238


>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
           MATH domain; similar to Speckle-type POZ protein
           (SP:O43791) [Homo sapiens]
          Length = 415

 Score = 30.7 bits (66), Expect = 0.77
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +2

Query: 257 HKLVLSVCSPYFQEMFKMNPTQ-HPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 427
           HKLVL+  S +F+ MF     + +  V + D+     + LL FMY+  +    E L +
Sbjct: 219 HKLVLAARSQFFRSMFYNTLAENNSDVVISDLEPKVFKALLHFMYKDSLPGDVEPLTA 276


>At5g48510.1 68418.m05998 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
           POZ protein (SP:O43791) [Homo sapiens]
          Length = 224

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFKMN----PTQH-PIVFLKDVSHSALRDLLQFMYQG----EV 400
           I+ HKL+L+  S  F+ MF+++     T+H   + L ++ H  L   ++F+         
Sbjct: 39  ISAHKLILASRSEVFKNMFELDEFKTSTKHVETITLSEMKHEELEAFVEFICSDGSMLSA 98

Query: 401 NVKQEELASFIS 436
           NVKQ   + +++
Sbjct: 99  NVKQHARSLYLA 110


>At4g04090.1 68417.m00578 speckle-type POZ protein-related contains
           Pfam PF00651 : BTB/POZ domain;  similar to Speckle-type
           POZ protein (SP:O43791) [Homo sapiens]
          Length = 192

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRDLLQFMY 388
           I+ HK +LS  S  F+EMF+ +     ++   + L ++ H  L   + F Y
Sbjct: 38  ISAHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEAFVDFTY 88


>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
           protein / BTB/POZ domain-containing protein contains
           armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
           BTB/POZ domain, Pfam:PF00651
          Length = 709

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +2

Query: 257 HKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASF 430
           HK+ L   S  F+ MF           V + ++       +++F+Y G +N+ +      
Sbjct: 554 HKIGLVASSDIFRAMFDGLYKERNAQNVEIPNIRWEVFELMMKFIYSGRINIAKHLAKDL 613

Query: 431 ISTAEQLQVKGL 466
           +  A+Q  ++GL
Sbjct: 614 LVAADQYLLEGL 625


>At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ
           domain-containing protein contains Pfam domain, PF00023:
           Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
          Length = 586

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
 Frame = +2

Query: 248 IATHKLVLSVCSPYFQEMF----KMNPTQHPIVFLKD------VSHSALRDLLQFMYQGE 397
           +  H+ +L+  S +FQ++F    K++ T+ P   L++      V+H A    L ++Y G 
Sbjct: 71  VGVHRCILAARSKFFQDLFKKEKKISKTEKPKYQLREMLPYGAVAHEAFLYFLSYIYTGR 130

Query: 398 V 400
           +
Sbjct: 131 L 131


>At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger)
           family protein contains zinc finger, C3HC4 type (RING
           finger), signature, PROSITE:PS00518
          Length = 617

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/56 (23%), Positives = 27/56 (48%)
 Frame = +2

Query: 368 DLLQFMYQGEVNVKQEELASFISTAEQLQVKGLTGNQNEESSTPSKPSRLRGQAPG 535
           DL +F+   +VN +  E+      +E+     ++  + EES  P+K  ++   + G
Sbjct: 554 DLSEFLQNPQVNREMMEIIENFKKSEEEADASISEEEEEESEPPTKKIKMDNNSVG 609


>At2g40440.1 68415.m04990 BTB/POZ domain-containing protein contains
           Pfam PF00651: BTB/POZ domain; contains  Interpro
           IPR000210/ PS50097: BTBB/POZ domain;
          Length = 194

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +2

Query: 251 ATHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRDLLQFMY 388
           + HKLVLS  S  F++M + +      Q   + L ++ H  L   ++F+Y
Sbjct: 41  SAHKLVLSARSEVFKKMLESDEIKASAQLETITLCEMKHEELEAFIEFIY 90


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,019,415
Number of Sequences: 28952
Number of extensions: 226555
Number of successful extensions: 600
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)