Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0604
(538 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0367 - 17236838-17236852,17237051-17237152,17237246-17238283 30 1.3
06_03_0205 - 17894623-17894724 30 1.3
04_03_0210 + 12691551-12692099 30 1.3
02_05_0260 - 27233734-27234324,27234422-27234573,27235006-272351... 29 1.8
08_01_0271 - 2189482-2190567 29 2.3
06_03_1471 + 30374988-30375959 29 2.3
06_01_0011 + 162301-163218,163349-163987 29 2.3
12_02_0915 - 24252495-24253079,24253560-24254759,24255234-242553... 29 3.1
10_08_0003 - 13992276-13992311,13992461-13992598,13992682-139928... 29 3.1
09_01_0013 - 355103-355435 29 3.1
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 29 3.1
01_03_0145 - 13116302-13116958,13117365-13117430,13117786-131180... 29 3.1
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 28 4.1
05_06_0278 + 26894802-26895362 28 4.1
04_04_1384 + 33152452-33153408 28 4.1
02_05_0600 - 30273080-30274692,30274709-30274949 28 4.1
11_04_0152 + 14153539-14154060 28 5.4
11_01_0700 + 5764149-5764979 28 5.4
04_04_0151 + 23134467-23134627,23134657-23134803,23135413-231355... 28 5.4
03_01_0526 + 3956909-3957071,3957262-3957317,3957398-3957462,395... 28 5.4
02_05_1348 + 35840197-35841291 28 5.4
02_04_0290 - 21627733-21628353,21628424-21628663,21628874-216292... 28 5.4
02_01_0302 - 2021221-2023305 28 5.4
01_05_0491 - 22680011-22680125,22680210-22680307,22680392-226804... 28 5.4
11_07_0014 + 27379941-27379974,27381975-27382033,27382561-273827... 27 7.2
09_02_0267 - 6485428-6485895,6488255-6488303,6488466-6488469,648... 27 7.2
04_01_0030 - 376883-377524 27 7.2
03_06_0301 - 32974276-32974638,32974842-32974967,32975056-329751... 27 7.2
03_01_0345 - 2708483-2709346 27 7.2
06_01_1179 + 10137652-10138038 27 9.5
03_05_0362 + 23455372-23455619,23456570-23456966,23457400-23457561 27 9.5
01_01_0492 - 3632812-3633189,3633563-3633709,3633906-3633995,363... 27 9.5
>10_08_0367 - 17236838-17236852,17237051-17237152,17237246-17238283
Length = 384
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +2
Query: 248 LVELGSXSECVGRSGGGAPSPQSARVSSNGAGGMAVSRVPSP 373
L +GS S +G S A SP+ A S+N GG A R P P
Sbjct: 167 LTPMGSKSNGIGASAFLA-SPRPATRSANDGGGFAFFRSPEP 207
>06_03_0205 - 17894623-17894724
Length = 33
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 287 SGGGAPSPQSARVSSNGAGG 346
SGGGA SAR NGAGG
Sbjct: 2 SGGGAADSTSARTEGNGAGG 21
>04_03_0210 + 12691551-12692099
Length = 182
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +1
Query: 289 GRRRALSAVGARLFERRWRDGG 354
GRRRA AVGA RRW D G
Sbjct: 114 GRRRAADAVGAWAEGRRWYDAG 135
>02_05_0260 -
27233734-27234324,27234422-27234573,27235006-27235153,
27235547-27235956,27236137-27236212
Length = 458
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 245 LLVELGSXSECVGRSGGGAPSPQSARVSSNGAGG 346
+L E+ S S G SGGGAP S R ++ G GG
Sbjct: 398 VLEEIESMSR--GGSGGGAPGSASPRPAARGGGG 429
>08_01_0271 - 2189482-2190567
Length = 361
Score = 29.1 bits (62), Expect = 2.3
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +2
Query: 158 VLKSGDILENWIIRTNNGLSQV*SANRALLLVELGSXSECVGRSGGGAPSPQSARVSSNG 337
V++SGD+ ++R G +V A RALL + L VG GA SA VSS G
Sbjct: 126 VMESGDV--GVLLRHAAGGDEV--AARALLHLSLDGDDARVGLVADGAVDALSAAVSSGG 181
Query: 338 A 340
A
Sbjct: 182 A 182
>06_03_1471 + 30374988-30375959
Length = 323
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 260 GSXSECVGRSGGGAPSPQSARVSSNGAGGMAVSRVPS 370
G S+C G GGG P+P S G GG V+ + S
Sbjct: 54 GCQSQCSGSCGGGGPTPPS------GGGGSGVASIVS 84
>06_01_0011 + 162301-163218,163349-163987
Length = 518
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 381 SCNGLGTRLTAIPPAPFEETRADCGEGAPPPDRPTHSLXEPSSTKRSAR 235
+C G+G + A+P F C + APPP +P E ++ SAR
Sbjct: 452 ACPGMGLAMQAVPA--FLAALVQCFDWAPPPSQPLPLDMEEAAGLVSAR 498
>12_02_0915 -
24252495-24253079,24253560-24254759,24255234-24255303,
24257127-24257188
Length = 638
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Frame = +2
Query: 281 GRSGGGA-------PSPQSARVSSNGAGGMAVSRVPSPLHDGNTPVAEN 406
G SGGG P P SA +G GG+ ++ S L G EN
Sbjct: 564 GVSGGGGDQAACKKPPPSSASAKGSGGGGLMPKKILSKLWSGKASSGEN 612
>10_08_0003 -
13992276-13992311,13992461-13992598,13992682-13992852,
13992926-13992989,13993404-13993552,13993700-13993753,
13993894-13994034,13994134-13994412,13994518-13994743,
13995328-13995734
Length = 554
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +2
Query: 260 GSXSECVGRSGGGAPSPQSARVSSNGAGGMAVSRVPSPLHDGNTPVAE 403
G G GGG G+GGM SRV + L+ V E
Sbjct: 72 GDNGAAAGGDGGGCDYDYDLFTIGAGSGGMRASRVAASLYGARAAVCE 119
>09_01_0013 - 355103-355435
Length = 110
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 298 RALSAVGARLFERRWRDGGEPRAQPVARRKHARRRKLVLHTSQSG 432
R +A G R + RWR PR +P RR +RR+ H+ + G
Sbjct: 29 RGGAAGGRRAWRPRWRPQRRPRWRP-QRRLGQQRRRATWHSFRQG 72
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 351 AIPPAPFEETRADCGEGAPPPDRP 280
A PP P +E GAPPP P
Sbjct: 184 AAPPPPADEDGTSASAGAPPPQAP 207
>01_03_0145 -
13116302-13116958,13117365-13117430,13117786-13118065,
13118283-13119028
Length = 582
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Frame = +2
Query: 260 GSXSECVGRSGGGAPSPQSARVSSN----GAGGMAV----SRVPSPLHDGNTP 394
G+ +C+GRSG A ++ +SS+ G+G +V S PS +HDG P
Sbjct: 159 GNKHQCIGRSGSSALIAKNRSLSSDKLKPGSGKSSVFLRLSFPPSNVHDGILP 211
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 281 GRSGGGAPSPQSARVSSNGAGG 346
G GGG P P R+ S+G GG
Sbjct: 15 GGGGGGGPPPPRRRLRSSGGGG 36
>05_06_0278 + 26894802-26895362
Length = 186
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 9/52 (17%)
Frame = +2
Query: 278 VGRSGGGAPSPQSAR-------VSSNGAGGMAVSRV-PSPLHDGNT-PVAEN 406
+GRSGG P PQS R V +GG A + PSP G+T P++++
Sbjct: 73 LGRSGGAPPPPQSNRPVTPLAGVDGGVSGGRAPTNTPPSPQPGGSTKPLSDD 124
>04_04_1384 + 33152452-33153408
Length = 318
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 269 SECVGRSGGGAPSPQSARVSSNGAGGMAVSRVPSPLHD 382
S SG GA + S +S G+G AVS +P P+ D
Sbjct: 43 SHFASASGSGAAADSSGGGASAGSGTGAVSALPLPVFD 80
>02_05_0600 - 30273080-30274692,30274709-30274949
Length = 617
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 296 GAPSPQSARVSSNGAGGMAVSRVPSPLHDGNTPVAENWCF 415
G PSPQ VS+ AG A LH A +WCF
Sbjct: 157 GLPSPQPTGVSAYTAGLYAAVVGRLRLHRPAASTAADWCF 196
>11_04_0152 + 14153539-14154060
Length = 173
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 287 SGGGAPSPQSARVSSNGAGGMAVSRVPSPLHDGNTPV 397
+GGG + ARV G + R+ P G PV
Sbjct: 13 AGGGVGAADGARVEEGSTGEIPARRMERPARHGGVPV 49
>11_01_0700 + 5764149-5764979
Length = 276
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 275 CVGRSGGGAPSPQSARVSSNGAGG 346
CVGRSGGG +AR G+ G
Sbjct: 191 CVGRSGGGGGGDGAARRGGRGSRG 214
>04_04_0151 +
23134467-23134627,23134657-23134803,23135413-23135512,
23135554-23135638,23135767-23136419
Length = 381
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 284 RSGGGAPSPQSARV-SSNGAGGMAVSRVPS 370
R+GG +PSP R+ SS+ +G +A +R S
Sbjct: 17 RAGGASPSPLPRRIRSSSASGALAAARSAS 46
>03_01_0526 +
3956909-3957071,3957262-3957317,3957398-3957462,
3957560-3958006,3958102-3958227,3958328-3958511,
3958788-3958943
Length = 398
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 302 PSPQSARVSSNGAGGMAVSRVP--SPLHDGNTP 394
PSP + RV + AGGM+++ P PL + TP
Sbjct: 320 PSPSTNRVKNVKAGGMSMASSPLKKPLKEKGTP 352
>02_05_1348 + 35840197-35841291
Length = 364
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 281 GRSGGGAPSPQSARVSSNGAGG 346
G + GG+P Q+A+ +S GAGG
Sbjct: 15 GSNDGGSPCSQAAQAASAGAGG 36
>02_04_0290 -
21627733-21628353,21628424-21628663,21628874-21629214,
21630934-21631612,21631893-21631962,21632063-21632190
Length = 692
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 284 RSGGGAPSPQSARVSSNGAGGMAVSRVPSPLHDGNTPVAENWCFTQVKVVKFSY 445
R GGG+ S R + G GG S+ SP P +W F V V++ +
Sbjct: 231 RGGGGSGGTASPRWNVGGGGG-GESKESSPSRQAVPPA--DWWFEDVSVLRIDH 281
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 254 ELGSXSECVGRSGGGAPSPQSARVSSNGAGGMAVS 358
E+ + + V GGGAPSP +A++ G + S
Sbjct: 610 EMDALQKQVDGRGGGAPSPAAAKIGKQQQQGTSAS 644
>02_01_0302 - 2021221-2023305
Length = 694
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = -2
Query: 420 CVKHQFSATGVFPSCNGLGTRLTAIPPAPFEETRADCGE-GAPPPDRPTHSLXEPSST 250
C K Q A P+ G R PPAP G PP PT S PSS+
Sbjct: 375 CSKAQCQAASYTPTPGGSPGRGGQGPPAPVSSPPRRRGPYPQPPSSSPTPSYPSPSSS 432
>01_05_0491 -
22680011-22680125,22680210-22680307,22680392-22680472,
22680564-22680677,22680757-22680823,22680947-22681017,
22681099-22681236,22681324-22681530,22681630-22681773,
22681856-22682017,22682117-22682173,22682256-22682348,
22682425-22682542,22682678-22682817,22683031-22683590,
22683703-22683805
Length = 755
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
Frame = +1
Query: 292 RRRALSAVGARLFERRWRDGGEPRAQPVA-------RRKHARRRKLVLHTSQ 426
RRRA A A L + RWR R A RR+ ARRR L Q
Sbjct: 101 RRRAARAAAAALIQARWRARAAAREHAAAVICQCAWRRRAARRRLARLRIEQ 152
>11_07_0014 +
27379941-27379974,27381975-27382033,27382561-27382782,
27383727-27383810,27385054-27385131,27385716-27385832,
27385956-27386019,27386399-27386402,27386565-27386613,
27388973-27389440
Length = 392
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = -2
Query: 417 VKHQFSATGVFPSCNGLGTRLTAIPPAPFEETRADCGEGAPPPDRPTHSLXEPSSTKRSA 238
+ ++ SA P + TA P AP + + G+G P +PT + + + KR
Sbjct: 216 LSYRVSANSTVPPTLTWELQSTATPKAPKVKEQFQLGDG-EPKKKPTSTPSQKRNNKRKR 274
Query: 237 RFA-DYTWLRPLFVRIIQFSKMSPLLSTHMIT 145
A + W R +RI++ M+ +TH T
Sbjct: 275 VTAFERLWSRAGELRILR--AMASHTNTHRST 304
>09_02_0267 -
6485428-6485895,6488255-6488303,6488466-6488469,
6488849-6488912,6489036-6489152,6489737-6489814,
6491058-6491141,6492086-6492307,6492835-6492893,
6494894-6494927
Length = 392
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = -2
Query: 417 VKHQFSATGVFPSCNGLGTRLTAIPPAPFEETRADCGEGAPPPDRPTHSLXEPSSTKRSA 238
+ ++ SA P + TA P AP + + G+G P +PT + + + KR
Sbjct: 216 LSYRVSANSTVPPTLTWELQSTATPKAPKVKEQFQLGDG-EPKKKPTSTPSQKRNNKRKR 274
Query: 237 RFA-DYTWLRPLFVRIIQFSKMSPLLSTHMIT 145
A + W R +RI++ M+ +TH T
Sbjct: 275 VTAFERLWSRAGELRILR--AMASHTNTHRST 304
>04_01_0030 - 376883-377524
Length = 213
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +2
Query: 236 RALLLVELGSXSECVGRSGGGAPSPQSARVSSNGAGGMAVSRVPSPLHD 382
+A L V C G GGG S S R G GG AV L D
Sbjct: 78 QAALTVGADRARSCSGYLGGGGSSSSSKRSGGGGRGG-AVGDCADTLRD 125
>03_06_0301 -
32974276-32974638,32974842-32974967,32975056-32975131,
32975935-32976130,32976666-32976759,32977773-32978195
Length = 425
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 284 RSGGGAPSPQSARVSSNGAGGMAVSRVPS 370
+ GGG S V+ G GG A++R PS
Sbjct: 30 QGGGGVASGGGGGVAGGGGGGNAMNRCPS 58
>03_01_0345 - 2708483-2709346
Length = 287
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 260 GSXSECVGRSGGGAP-SPQSARVSSNGAGGMAVSRVPSPLHDGN 388
G ++ G +GGGAP + Q SSNG G + + L G+
Sbjct: 168 GGYNQWCGSNGGGAPAASQPGAYSSNGGAGHGHDSITALLAAGS 211
>06_01_1179 + 10137652-10138038
Length = 128
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 284 RSGGGAPSPQSARVSSNGAGGMAVSRVPSPLHDGNTPVAE 403
R G A +P + +S AGG VS P+P +PVA+
Sbjct: 54 RKAGPAAAPTTTVATSAPAGGDEVSIPPTPFATVVSPVAD 93
>03_05_0362 + 23455372-23455619,23456570-23456966,23457400-23457561
Length = 268
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 287 SGGGAPSPQSARVSSNGAGGMAVSRVP 367
S GG+PS + VSSN +G +V+ P
Sbjct: 155 SCGGSPSTTTTTVSSNESGSSSVASTP 181
>01_01_0492 -
3632812-3633189,3633563-3633709,3633906-3633995,
3634278-3634331,3636434-3636598,3637252-3637488,
3637610-3637696,3637846-3638022
Length = 444
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 286 VGRRRALSAVGARLFERRWRDGGEPRAQPVARRKHARRRKLVLHTS 423
VG A A +F + W DGGE + + RRR ++ +S
Sbjct: 97 VGGAAAAEAEEEAVFPQAWTDGGESCPEKTVPVRRTRRRDVLRSSS 142
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,296,865
Number of Sequences: 37544
Number of extensions: 276628
Number of successful extensions: 1635
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1628
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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