Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0604
(538 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 29 0.075
DQ219482-1|ABB29886.1| 545|Anopheles gambiae cryptochrome 1 pro... 25 2.1
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 25 2.1
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 24 2.8
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 24 2.8
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 24 2.8
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 24 3.7
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 4.9
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 8.6
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 8.6
AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein hom... 23 8.6
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 29.5 bits (63), Expect = 0.075
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +2
Query: 260 GSXSECVGRSGGGAPSPQSARVSSNGAGG 346
G S+ +G GGGA P R SS GAGG
Sbjct: 831 GDPSDTIGAGGGGAGGP--LRGSSGGAGG 857
>DQ219482-1|ABB29886.1| 545|Anopheles gambiae cryptochrome 1
protein.
Length = 545
Score = 24.6 bits (51), Expect = 2.1
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +1
Query: 277 RWPVGRRRALSAVGARL--FERRWRDG 351
+W G RAL A+GARL E +R+G
Sbjct: 222 KWIGGETRALEALGARLKQEEEAFREG 248
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 24.6 bits (51), Expect = 2.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 295 RRALSAVGARLFERRWRDGGEPRAQPVARRKHARRRKLVLHTSQ 426
RR S AR +R + G P + P + R ARR L L ++
Sbjct: 1047 RRNASRRAARARQRELQRAGRPPSPPPSPRTAARRADLRLRQAR 1090
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 24.2 bits (50), Expect = 2.8
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = -2
Query: 411 HQFSATG---VFPSCNGLGTRLTAIPP 340
H FSA + SCN LG + +PP
Sbjct: 363 HHFSAASQRFMLRSCNSLGDHIPPLPP 389
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 24.2 bits (50), Expect = 2.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 269 SECVGRSGGGAPSPQSARVSSNGAGGMAVSRVPSPLHDGNTPVAENWC 412
S C +G +PS +R S+ GA + ++ P PVA C
Sbjct: 1340 SPCKPTNGSLSPSATHSRFSTPGARSLPLTPPSVPYASDRPPVATFSC 1387
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 24.2 bits (50), Expect = 2.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 269 SECVGRSGGGAPSPQSARVSSNGAGGMAVSRVPSPLHDGNTPVAENWC 412
S C +G +PS +R S+ GA + ++ P PVA C
Sbjct: 1337 SPCKPTNGSLSPSATHSRFSTPGARSLPLTPPSVPYASDRPPVATFSC 1384
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 23.8 bits (49), Expect = 3.7
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -2
Query: 420 CVKHQFSATGVFPSCNGLGTRLTAIPPAPFEETRAD 313
CV+ Q TG N T T P P E+ D
Sbjct: 687 CVQCQQYKTGPLAEANECATNCTLFVPIPVEKVTID 722
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.4 bits (48), Expect = 4.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 296 GAPSPQSARVSSNGAGGMAVSRVPSP 373
G P PQ + +SN +GGM V P
Sbjct: 273 GGPRPQISPQNSNLSGGMPSGMVGPP 298
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 22.6 bits (46), Expect = 8.6
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +2
Query: 260 GSXSECVGRSGGGAPSPQSARVSSNGAGGMAVSRVPSPL 376
GS +EC + AP+ S S + S SPL
Sbjct: 1300 GSGTECSASTSEPAPAAPSNSTPSRSVARIVTSFTDSPL 1338
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 22.6 bits (46), Expect = 8.6
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +3
Query: 165 KVVTFWKIGLYERIMALARYNQ 230
KV +W++G YE + Y++
Sbjct: 1860 KVAKYWQVGNYEHRLTTYTYSE 1881
>AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein
homolog protein.
Length = 394
Score = 22.6 bits (46), Expect = 8.6
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +2
Query: 302 PSPQSARVSSNGAGGMAVSRVPSPLHDGNTP 394
PSP + S G+GG + LH G P
Sbjct: 89 PSPGAGGTGSGGSGGGSGGIGSGALHLGQNP 119
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,411
Number of Sequences: 2352
Number of extensions: 10002
Number of successful extensions: 31
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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