Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0604
         (538 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g17280.1 68417.m02597 auxin-responsive family protein similar...    29   2.0  
At1g61080.1 68414.m06877 proline-rich family protein                   29   2.6  
At5g66960.1 68418.m08442 prolyl oligopeptidase family protein si...    28   3.4  
At4g35110.2 68417.m04989 expressed protein                             28   3.4  
At4g35110.1 68417.m04988 expressed protein                             28   3.4  
At3g12590.1 68416.m01568 expressed protein                             28   4.5  
At5g19670.1 68418.m02340 exostosin family protein contains Pfam ...    27   6.0  
At1g08420.1 68414.m00931 kelch repeat-containing protein / serin...    27   6.0  

>At4g17280.1 68417.m02597 auxin-responsive family protein similar to
           auxin-induced protein AIR12 (GI:11357190) [Arabidopsis
           thaliana]
          Length = 297

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 423 TCVKHQFSATGVFPSCNGL 367
           TC K++FS+  VF SCN L
Sbjct: 33  TCSKYKFSSNNVFDSCNDL 51


>At1g61080.1 68414.m06877 proline-rich family protein 
          Length = 907

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 299 APSPQSARVSSNGAGGMAVSRVPSPLHDGNTP 394
           APSP    + ++G+GG      P PL +G TP
Sbjct: 574 APSPPPMPMGNSGSGGPPPPPPPMPLANGATP 605


>At5g66960.1 68418.m08442 prolyl oligopeptidase family protein
           similar to OpdB [Treponema denticola] GI:13786054;
           contains Pfam profiles PF00326: prolyl oligopeptidase
           family, PF02897: Prolyl oligopeptidase, N-terminal
           beta-propeller domain
          Length = 792

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 300 APPPDRPTHSLXEPSSTKRSARFADYTWLRP 208
           +PPP  P  +L +P    +S  F D TW  P
Sbjct: 29  SPPPPPPPPALPKPPKKPQSFTFHDATWEDP 59


>At4g35110.2 68417.m04989 expressed protein
          Length = 386

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 18/52 (34%), Positives = 20/52 (38%)
 Frame = +2

Query: 245 LLVELGSXSECVGRSGGGAPSPQSARVSSNGAGGMAVSRVPSPLHDGNTPVA 400
           LL   GS       S    P+P SAR   NG GG A    P   H    P +
Sbjct: 45  LLSFSGSFGRKKKESNSQPPTPLSARPYQNGRGGFANGNSPKVHHSVAPPAS 96


>At4g35110.1 68417.m04988 expressed protein
          Length = 386

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 18/52 (34%), Positives = 20/52 (38%)
 Frame = +2

Query: 245 LLVELGSXSECVGRSGGGAPSPQSARVSSNGAGGMAVSRVPSPLHDGNTPVA 400
           LL   GS       S    P+P SAR   NG GG A    P   H    P +
Sbjct: 45  LLSFSGSFGRKKKESNSQPPTPLSARPYQNGRGGFANGNSPKVHHSVAPPAS 96


>At3g12590.1 68416.m01568 expressed protein
          Length = 1162

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
 Frame = -2

Query: 393 GVFPSCNGLGTRLTAIPPAPFEETRADCGEGAPPPDRPTHSL---XEPSSTKRSAR 235
           G   S + L +  +  PP P     ADC   +PPP    H       PS   R+ R
Sbjct: 20  GAAGSASRLRSSSSKKPPEPLRRAVADCLSSSPPPVNSHHGAIPSMAPSEALRNLR 75


>At5g19670.1 68418.m02340 exostosin family protein contains Pfam
           domain, PF03016: Exostosin family
          Length = 600

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 220 LAKAIIRSYNPIFQNVTTFKHSYD 149
           +AK     Y PIF+NV+ FK SY+
Sbjct: 242 VAKLERELYPPIFRNVSLFKRSYE 265


>At1g08420.1 68414.m00931 kelch repeat-containing protein /
           serine/threonine phosphoesterase family protein contains
           Pfam profiles: PF00149 calcineurin-like phosphoesterase,
           PF01344 kelch motif
          Length = 1018

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 315 DCGEGAPPPDRPTHSLXEPSS 253
           DCG  A P  +PT SL +P S
Sbjct: 571 DCGAEATPSGKPTFSLIKPDS 591


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,285,395
Number of Sequences: 28952
Number of extensions: 197872
Number of successful extensions: 639
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)