Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0602
         (508 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q677X1 Cluster: Ervl/Alr family protein; n=2; Lymphocys...    33   2.8  
UniRef50_A6PEG7 Cluster: Molydopterin dinucleotide-binding regio...    33   2.8  
UniRef50_Q4P3U8 Cluster: Putative uncharacterized protein; n=1; ...    32   8.6  

>UniRef50_Q677X1 Cluster: Ervl/Alr family protein; n=2;
           Lymphocystivirus|Rep: Ervl/Alr family protein -
           Lymphocystis disease virus - isolate China
          Length = 145

 Score = 33.5 bits (73), Expect = 2.8
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 129 PRTFACATTKNHYRLDLRTLGLKMVVRTPKGLF 227
           P    C+T KNHY+  +  + LK VV T K LF
Sbjct: 65  PALIPCSTCKNHYKEIMIRVDLKKVVHTKKSLF 97


>UniRef50_A6PEG7 Cluster: Molydopterin dinucleotide-binding region
           precursor; n=1; Shewanella sediminis HAW-EB3|Rep:
           Molydopterin dinucleotide-binding region precursor -
           Shewanella sediminis HAW-EB3
          Length = 1026

 Score = 33.5 bits (73), Expect = 2.8
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -2

Query: 303 GGVLAS*TSSSAGTRFVPSLTNESVETDLLVFEPPSLAPEYEGQDDN 163
           G V A  T+ +A T+ + S  +++ + D+  + P SL PEY    DN
Sbjct: 10  GSVAAVMTAGTASTQVMSSANSKTSDADINRYAPTSLTPEYRFDADN 56


>UniRef50_Q4P3U8 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 650

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 189 PEYEGQDDNDSWLLHRQKFLEETE 118
           PE E + + DSWLLH+Q  LE  E
Sbjct: 206 PEPEPEPERDSWLLHKQDCLETVE 229


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,532,565
Number of Sequences: 1657284
Number of extensions: 7468890
Number of successful extensions: 21151
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21148
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)