Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0601
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          28   0.072
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      28   0.072
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   3.6  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   3.6  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   6.2  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    21   8.2  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 27.9 bits (59), Expect = 0.072
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -2

Query: 541 WPSSSKYQIXVFIRIVIYYPLGSPVNETKFLARQSN 434
           W SSS+Y +   IR  +YY L   +    FL R SN
Sbjct: 244 WMSSSQYHMPKEIRGQLYYFLHKQLMTRYFLERMSN 279


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 27.9 bits (59), Expect = 0.072
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -2

Query: 541 WPSSSKYQIXVFIRIVIYYPLGSPVNETKFLARQSN 434
           W SSS+Y +   IR  +YY L   +    FL R SN
Sbjct: 244 WMSSSQYHMPKEIRGQLYYFLHKQLMTRYFLERMSN 279


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +2

Query: 2   EMFTNTFFKSFLTFIFERTKFKRNIINGLQPKYLDQ 109
           + +     K F   + E   FK NI+  L   YLD+
Sbjct: 60  QRYNECILKQF-NIVDESGNFKENIVQELTSIYLDE 94


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +2

Query: 2   EMFTNTFFKSFLTFIFERTKFKRNIINGLQPKYLDQ 109
           + +     K F   + E   FK NI+  L   YLD+
Sbjct: 60  QRYNECILKQF-NIVDESGNFKENIVQELTSIYLDE 94


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 348 ELQDRNEKLFFSLL 389
           E+ DRN  LFF LL
Sbjct: 312 EVMDRNGVLFFGLL 325


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 120 IFLLWSKYLGCKPFIILRLNFVLSKINVKND 28
           I L +S       F+IL  ++++  +N++ND
Sbjct: 58  IVLAFSGLFSVFSFLILVSSYIVILVNLRND 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,452
Number of Sequences: 438
Number of extensions: 3107
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)