Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0601
(548 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g25880.1 68418.m03071 malate oxidoreductase, putative similar... 49 2e-06
At2g19900.1 68415.m02326 malate oxidoreductase, putative similar... 48 3e-06
At5g11670.1 68418.m01364 malate oxidoreductase, putative similar... 46 1e-05
At4g00570.1 68417.m00080 malate oxidoreductase, putative similar... 41 5e-04
At1g79750.1 68414.m09304 malate oxidoreductase, putative similar... 40 8e-04
At2g13560.1 68415.m01495 malate oxidoreductase, putative similar... 39 0.003
At3g22710.1 68416.m02865 F-box family protein contains F-box dom... 29 1.5
At4g37340.1 68417.m05289 cytochrome P450 family protein Similar ... 29 2.7
At4g25720.1 68417.m03702 glutamine cyclotransferase family prote... 28 4.7
At3g29796.1 68416.m03790 hypothetical protein 28 4.7
At4g37360.1 68417.m05291 cytochrome P450 family protein cytochro... 27 8.3
At2g05290.1 68415.m00557 expressed protein similar to zinc finge... 27 8.3
>At5g25880.1 68418.m03071 malate oxidoreductase, putative similar to
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
(SP:P12628) {Phaseolus vulgaris}
Length = 588
Score = 48.8 bits (111), Expect = 2e-06
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Frame = +2
Query: 164 GIDHIKDPRLNKGLAFTLEEHKL*VFTDFWPQI*--NPGRTVGVLPNFIR*I*RRFE*IP 337
G ++DPR NKGLAFT +E T P + + V+ N + +
Sbjct: 49 GYTLMRDPRYNKGLAFTDKERDAHYITGLLPPVVLSQDVQERKVMHNLRQYTVPLQRYMA 108
Query: 338 LFD*VAR*E*KTIFQFT*L*HRXIHAIVYTPTVGLACQKFGLVYRRPERIIYHYSDKDXY 517
L D R E + ++ + +VYTPTVG ACQK+G +YRRP+ + +K
Sbjct: 109 LMDLQERNE-RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKEKGKI 167
Query: 518 LIF*RTGPE 544
L + P+
Sbjct: 168 LEVLKNWPQ 176
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +3
Query: 348 ELQDRNEKLFFSLLDCDIXKFMPLCTRLRLDWRARNLVSFTGDPRG*YITILIKTHI 518
+LQ+RNE+LF+ LL ++ + +P+ + + S P+G YI++ K I
Sbjct: 111 DLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKEKGKI 167
>At2g19900.1 68415.m02326 malate oxidoreductase, putative similar to
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
(SP:P51615) {Vitis vinifera}
Length = 581
Score = 48.4 bits (110), Expect = 3e-06
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Frame = +2
Query: 164 GIDHIKDPRLNKGLAFTLEEHKL*VFTDFWPQI*NPGRTVGV-LPNFIR*I*RRFE*IPL 340
G ++DPR NKGLAFT +E P + + L N IR +
Sbjct: 42 GYSLLRDPRYNKGLAFTEKERDTHYLRGLLPPVVLDQKLQEKRLLNNIRQYQFPLQKYMA 101
Query: 341 FD*VAR*E*KTIFQFT*L*HRXIHAIVYTPTVGLACQKFGLVYRRPERIIYHYSDKDXYL 520
+ + ++ + IVYTPTVG ACQKFG ++RRP+ + DK L
Sbjct: 102 LTELQERNERLFYKLLIDNVEELLPIVYTPTVGEACQKFGSIFRRPQGLFISLKDKGKIL 161
Query: 521 IF*RTGPE 544
+ PE
Sbjct: 162 DVLKNWPE 169
Score = 33.9 bits (74), Expect = 0.072
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +3
Query: 345 TELQDRNEKLFFSLLDCDIXKFMPLCTRLRLDWRARNLVSFTGDPRG*YITILIKTHI 518
TELQ+RNE+LF+ LL ++ + +P+ + + S P+G +I++ K I
Sbjct: 103 TELQERNERLFYKLLIDNVEELLPIVYTPTVGEACQKFGSIFRRPQGLFISLKDKGKI 160
>At5g11670.1 68418.m01364 malate oxidoreductase, putative similar to
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
(SP|P12628) {Phaseolus vulgaris}
Length = 588
Score = 46.4 bits (105), Expect = 1e-05
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Frame = +2
Query: 164 GIDHIKDPRLNKGLAFTLEEHKL*VFTDFWPQI*--NPGRTVGVLPNFIR*I*RRFE*IP 337
G ++DPR NKGLAFT +E T P + + V+ N + +
Sbjct: 49 GYTLMRDPRYNKGLAFTDKERDAHYLTGLLPPVILSQDVQERKVMHNLRQYTVPLQRYMA 108
Query: 338 LFD*VAR*E*KTIFQFT*L*HRXIHAIVYTPTVGLACQKFGLVYRRPERIIYHYSDKDXY 517
L D R E + ++ + +VYTPTVG ACQK+G ++R+P+ + ++K
Sbjct: 109 LMDLQERNE-RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRKPQGLYISLNEKGKI 167
Query: 518 LIF*RTGPE 544
L + P+
Sbjct: 168 LEVLKNWPQ 176
Score = 31.5 bits (68), Expect = 0.38
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +3
Query: 348 ELQDRNEKLFFSLLDCDIXKFMPLCTRLRLDWRARNLVSFTGDPRG*YITI 500
+LQ+RNE+LF+ LL ++ + +P+ + + S P+G YI++
Sbjct: 111 DLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRKPQGLYISL 161
>At4g00570.1 68417.m00080 malate oxidoreductase, putative similar to
NAD-dependent malic enzyme 59 kDa isoform, mitochondrial
precursor (EC 1.1.1.39) (NAD-ME) (SP:P37225) {Solanum
tuberosum}
Length = 607
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2
Query: 416 IVYTPTVGLACQKFGLVYRRPERIIYHYSDK 508
I+YTPTVGL CQ + +YRRP + + DK
Sbjct: 134 IIYTPTVGLVCQNYSGLYRRPRGMYFSAKDK 164
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 351 LQDRNEKLFFSLLDCDIXKFMPLCTRLRLDWRARNLVSFTGDPRG*YIT 497
L DRNE L++ +L +I F P+ + +N PRG Y +
Sbjct: 112 LHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLYRRPRGMYFS 160
>At1g79750.1 68414.m09304 malate oxidoreductase, putative similar to
malate oxidoreductase (NADP-dependent malic enzyme)
GB:P34105 (Populus balsamifera subsp. trichocarpa)
Length = 646
Score = 40.3 bits (90), Expect = 8e-04
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 416 IVYTPTVGLACQKFGLVYRRPERIIYHYSDKDXYLIF*RTGPE 544
++YTPTVG ACQK+G ++ RP+ + +K R PE
Sbjct: 192 VIYTPTVGEACQKYGSIFLRPQGLFISLKEKGKIHEVLRNWPE 234
>At2g13560.1 68415.m01495 malate oxidoreductase, putative similar to
NAD-dependent malic enzyme 62 kDa isoform, mitochondrial
precursor (EC 1.1.1.39) (NAD-ME) (SP:P37221) {Solanum
tuberosum}
Length = 623
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 416 IVYTPTVGLACQKFGLVYRRPERIIYHYSDK 508
IVYTPTVGL CQ + ++RRP + + D+
Sbjct: 141 IVYTPTVGLVCQNYSGLFRRPRGMYFSAEDR 171
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 161 RGIDHIKDPRLNKGLAFTLEE 223
+G+D + DP NKG AFT+ E
Sbjct: 45 QGLDILHDPWFNKGTAFTMTE 65
>At3g22710.1 68416.m02865 F-box family protein contains F-box domain
Pfam:PF00646
Length = 326
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 345 TELQDRNEKLFFSLLDCDIXKFMPLCTRLRLDWRARNLVSFTGDPRG*YITIL 503
T++ RN FS L D K + LC + D ++N+V G+ G Y IL
Sbjct: 233 TQVFSRNCVRVFSSLYIDKEKKVVLCCNVNDDATSKNIVYIIGEDNGYYTEIL 285
>At4g37340.1 68417.m05289 cytochrome P450 family protein Similar to
Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana];
Length = 500
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -3
Query: 213 VKARPLLSRGSFIWSMPLSMFGQIMLPVISCIFLLWSKYLGCKPFIILRL 64
+K RP L S W++P+ +++ P + +FL S+ LG P I LRL
Sbjct: 24 IKRRPNLPP-SPSWALPVIGHLRLLKPPLHRVFLSVSESLGDAPIISLRL 72
>At4g25720.1 68417.m03702 glutamine cyclotransferase family protein
contains Pfam profile: PF05096 glutamine
cyclotransferase
Length = 320
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -2
Query: 337 RYLFKSSSYLSNEIWQNSNCSSWVLNLGPKVREYLKLVLFEREG*ALIK 191
RYL Y++NE+W N S + + PK L +L + L+K
Sbjct: 220 RYL-NELEYINNEVWANVWQSDCIARISPKDGSLLGWILLSKLSRGLLK 267
>At3g29796.1 68416.m03790 hypothetical protein
Length = 463
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 23 FKSFLTFIFERTKFKRNIINGLQPKYLDQ 109
F +FL I T+F RN + L+ KYL Q
Sbjct: 363 FATFLRGIMTSTQFPRNCLANLRGKYLSQ 391
>At4g37360.1 68417.m05291 cytochrome P450 family protein cytochrome
P450 monooxygenase, Arabidopsis thaliana, PID:d1029478
Length = 499
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 174 WSMPLSMFGQIMLPVISCIFLLWSKYLGCKPFIILRL 64
W++P+ +++ P + +FL S+ LG P I LRL
Sbjct: 36 WALPVIGHLRLLKPPLHRVFLSVSQSLGDAPIISLRL 72
>At2g05290.1 68415.m00557 expressed protein similar to zinc finger
protein [Arabidopsis thaliana] GI:976277
Length = 383
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 74 IINGLQPKYLDQRRNMHEITGNIICPNMLRGIDHIKD-PRL 193
+IN QP + RN++ I G + P+ R I D PR+
Sbjct: 22 LINSDQPNFFSTERNLNSIMGRFLNPDKQRMSKWILDMPRI 62
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,002,927
Number of Sequences: 28952
Number of extensions: 212232
Number of successful extensions: 469
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -