Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0600
(659 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 239 9e-64
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 236 8e-63
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 236 1e-62
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 236 1e-62
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 234 4e-62
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 233 8e-62
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 233 8e-62
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 231 2e-61
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 231 4e-61
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 102 2e-22
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 102 2e-22
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 101 3e-22
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 101 6e-22
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 101 6e-22
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 99 3e-21
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 99 3e-21
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 85 4e-17
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 85 5e-17
At4g37190.1 68417.m05265 expressed protein 31 0.68
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.90
At5g53905.1 68418.m06707 expressed protein 29 3.6
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 3.6
At3g19570.2 68416.m02482 expressed protein contains Pfam domain,... 28 4.8
At3g19570.1 68416.m02481 expressed protein contains Pfam domain,... 28 4.8
At2g37820.1 68415.m04643 DC1 domain-containing protein contains ... 28 6.3
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 6.3
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 27 8.4
At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 27 8.4
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 8.4
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 239 bits (586), Expect = 9e-64
Identities = 121/198 (61%), Positives = 133/198 (67%), Gaps = 1/198 (0%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 243
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 244 VPRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXXX 423
VPRA LEPGTMDS+RSGP+GQIFRPDNFVF
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 424 XXKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDTV 603
K + G LLISKIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 604 VEPYNATLSVHQLVENTD 657
VEPYNATLSVHQLVEN D
Sbjct: 181 VEPYNATLSVHQLVENAD 198
Score = 89.8 bits (213), Expect = 1e-18
Identities = 37/42 (88%), Positives = 41/42 (97%)
Frame = +2
Query: 353 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 478
GAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDCLQGFQ+ H
Sbjct: 97 GAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCH 138
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 236 bits (578), Expect = 8e-63
Identities = 122/198 (61%), Positives = 131/198 (66%), Gaps = 1/198 (0%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 243
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 244 VPRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXXX 423
VPRA LEPGTMDS+RSGPFGQIFRPDNFVF
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 424 XXKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDTV 603
K + G LLISKIREEYPDR+M T+SV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 604 VEPYNATLSVHQLVENTD 657
VEPYNATLSVHQLVEN D
Sbjct: 181 VEPYNATLSVHQLVENAD 198
Score = 89.8 bits (213), Expect = 1e-18
Identities = 37/42 (88%), Positives = 41/42 (97%)
Frame = +2
Query: 353 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 478
GAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDCLQGFQ+ H
Sbjct: 97 GAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCH 138
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 236 bits (577), Expect = 1e-62
Identities = 122/197 (61%), Positives = 130/197 (65%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 247 PRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXXXX 426
PRA LEPGTMDS+RSGPFGQIFRPDNFVF
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 427 XKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 606
K + G LLISKIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 607 EPYNATLSVHQLVENTD 657
EPYNATLSVHQLVEN D
Sbjct: 181 EPYNATLSVHQLVENAD 197
Score = 87.0 bits (206), Expect = 1e-17
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = +2
Query: 353 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 478
GAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+ DCLQGFQ+ H
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCH 137
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 236 bits (577), Expect = 1e-62
Identities = 119/197 (60%), Positives = 131/197 (66%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 247 PRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXXXX 426
PRA LEPGTMDSVR+GP+GQIFRPDNFVF
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 427 XKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 606
K + G LLISKIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 607 EPYNATLSVHQLVENTD 657
EPYNATLSVHQLVEN D
Sbjct: 181 EPYNATLSVHQLVENAD 197
Score = 89.8 bits (213), Expect = 1e-18
Identities = 37/42 (88%), Positives = 41/42 (97%)
Frame = +2
Query: 353 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 478
GAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDCLQGFQ+ H
Sbjct: 96 GAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCH 137
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 234 bits (572), Expect = 4e-62
Identities = 121/197 (61%), Positives = 129/197 (65%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 247 PRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXXXX 426
PRA LEPGTMDS+RSGPFGQIFRPDNFVF
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 427 XKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 606
K + G LLISKIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 607 EPYNATLSVHQLVENTD 657
EPYNATLSVHQLVEN D
Sbjct: 181 EPYNATLSVHQLVENAD 197
Score = 91.1 bits (216), Expect = 6e-19
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = +2
Query: 353 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 478
GAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 233 bits (570), Expect = 8e-62
Identities = 119/197 (60%), Positives = 129/197 (65%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 247 PRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXXXX 426
PRA LEPGTMDS+RSGP+GQ FRPDNFVF
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 427 XKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 606
K + G LLISKIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 607 EPYNATLSVHQLVENTD 657
EPYNATLSVHQLVEN D
Sbjct: 181 EPYNATLSVHQLVENAD 197
Score = 91.1 bits (216), Expect = 6e-19
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = +2
Query: 353 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 478
GAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 233 bits (570), Expect = 8e-62
Identities = 119/197 (60%), Positives = 129/197 (65%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 247 PRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXXXX 426
PRA LEPGTMDS+RSGP+GQ FRPDNFVF
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 427 XKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 606
K + G LLISKIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 607 EPYNATLSVHQLVENTD 657
EPYNATLSVHQLVEN D
Sbjct: 181 EPYNATLSVHQLVENAD 197
Score = 91.1 bits (216), Expect = 6e-19
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = +2
Query: 353 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 478
GAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 231 bits (566), Expect = 2e-61
Identities = 118/197 (59%), Positives = 130/197 (65%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 247 PRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXXXX 426
PRA LEPGTMDSVRSGP+GQIFRPDNFVF
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 427 XKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 606
K + G LLISKIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 607 EPYNATLSVHQLVENTD 657
EPYNATLSVHQLVEN D
Sbjct: 181 EPYNATLSVHQLVENAD 197
Score = 91.1 bits (216), Expect = 6e-19
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = +2
Query: 353 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 478
GAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 231 bits (564), Expect = 4e-61
Identities = 117/197 (59%), Positives = 129/197 (65%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 247 PRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXXXX 426
PRA LEPGTMDSVRSGP+GQIFRPDNFVF
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 427 XKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 606
K + G LLISKIREEYPDR+M T+SV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 607 EPYNATLSVHQLVENTD 657
EPYNATLSVHQLVEN D
Sbjct: 181 EPYNATLSVHQLVENAD 197
Score = 91.1 bits (216), Expect = 6e-19
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = +2
Query: 353 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 478
GAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ+ H
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCH 137
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 102 bits (245), Expect = 2e-22
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 2/199 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 YVPRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXX 420
+VPRA LEP +D VR+G + Q+F P+ +
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 421 XXXKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDT 600
K + G LL+ ++ +Y + +++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 601 VVEPYNATLSVHQLVENTD 657
VVEPYN+ LS H L+E+TD
Sbjct: 181 VVEPYNSVLSTHSLLEHTD 199
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +2
Query: 356 AGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 466
A NN+A+GHYT G E+VD LD VRK A++C LQGF
Sbjct: 99 AANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGF 135
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 102 bits (245), Expect = 2e-22
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 2/199 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 YVPRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXX 420
+VPRA LEP +D VR+G + Q+F P+ +
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 421 XXXKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDT 600
K + G LL+ ++ +Y + +++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 601 VVEPYNATLSVHQLVENTD 657
VVEPYN+ LS H L+E+TD
Sbjct: 181 VVEPYNSVLSTHSLLEHTD 199
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +2
Query: 356 AGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 466
A NN+A+GHYT G E+VD LD VRK A++C LQGF
Sbjct: 99 AANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGF 135
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 101 bits (243), Expect = 3e-22
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 2/199 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 241 YVPRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXX 420
+VPRA LEP +D VR+G + Q+F P+ +
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 421 XXXKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDT 600
K + G LL+ ++ ++ + +++ PSP+VS
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 601 VVEPYNATLSVHQLVENTD 657
VVEPYN+ LS H L+E+TD
Sbjct: 181 VVEPYNSVLSTHSLLEHTD 199
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +2
Query: 356 AGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 466
A NN+A+GHYT G E+VD+ L+ +RK A++C LQGF
Sbjct: 99 AANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGF 135
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 101 bits (241), Expect = 6e-22
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 2/199 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXX 420
+VPRA LEP +D VR+G + Q+F P+ +
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 421 XXXKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDT 600
K + G LL+ ++ +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 601 VVEPYNATLSVHQLVENTD 657
VVEPYN+ LS H L+E+TD
Sbjct: 181 VVEPYNSVLSTHSLLEHTD 199
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +2
Query: 356 AGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 466
A NN+A+GHYT G E+VD LD +RK A++C LQGF
Sbjct: 99 AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 135
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 101 bits (241), Expect = 6e-22
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 2/199 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXX 420
+VPRA LEP +D VR+G + Q+F P+ +
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 421 XXXKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDT 600
K + G LL+ ++ +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 601 VVEPYNATLSVHQLVENTD 657
VVEPYN+ LS H L+E+TD
Sbjct: 181 VVEPYNSVLSTHSLLEHTD 199
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +2
Query: 356 AGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 466
A NN+A+GHYT G E+VD LD +RK A++C LQGF
Sbjct: 99 AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 135
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 98.7 bits (235), Expect = 3e-21
Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 2/199 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXX 420
+VPRA LEP +D VR+G + Q+F P+ +
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 421 XXXKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDT 600
K + G LL+ ++ +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 601 VVEPYNATLSVHQLVENTD 657
VVEPYN+ LS H L+E+TD
Sbjct: 181 VVEPYNSVLSTHSLLEHTD 199
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +2
Query: 356 AGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 466
A NN+A+GHYT G E+VD LD +RK A++C LQGF
Sbjct: 99 AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 135
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 98.7 bits (235), Expect = 3e-21
Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 2/199 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*AXXXXXX 420
+VPRA LEP +D VR+G + Q+F P+ +
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 421 XXXKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSPKVSDT 600
K + G LL+ ++ +Y + ++V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 601 VVEPYNATLSVHQLVENTD 657
VVEPYN+ LS H L+E+TD
Sbjct: 181 VVEPYNSVLSTHSLLEHTD 199
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +2
Query: 356 AGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 466
A NN+A+GHYT G E+VD LD +RK A++C LQGF
Sbjct: 99 AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 135
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 85.0 bits (201), Expect = 4e-17
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 3/199 (1%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 249
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 RASSSXLEPGTMDSVRSGPFGQIFRPDN-FVFXXXXXXXXXXXXXXXXXC*AXXXXXXXX 426
RA LEP ++ +++G + ++ +N FV
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQGKGVEEEIMDMI 122
Query: 427 XK-GSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSP-KVSDT 600
+ G L + ++A S LL + + Y +++ TYSV P+ + SD
Sbjct: 123 DREADGSDSLEGFVLCHSIAGGTGSGMGSYLL-ETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 601 VVEPYNATLSVHQLVENTD 657
VV+PYN+ L++ +L N D
Sbjct: 182 VVQPYNSLLTLKRLTLNAD 200
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +2
Query: 353 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 478
GAGNNWA G Y +G + + ++D++ +EA+ D L+GF L H
Sbjct: 99 GAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCH 139
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 84.6 bits (200), Expect = 5e-17
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 249
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 RASSSXLEPGTMDSVRSGPFGQIFRPDNFVFXXXXXXXXXXXXXXXXXC*A--XXXXXXX 423
RA LEP ++ +++G + ++ +N
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQGKGVEEEIMDMI 122
Query: 424 XXKGSGIV*LPPGIPTDTLAXXXXXXXXSXLLISKIREEYPDRIMNTYSVVPSP-KVSDT 600
+ G L + ++A S LL + + Y +++ TYSV P+ + SD
Sbjct: 123 DREADGSDSLEGFVLCHSIAGGTGSGMGSYLL-ETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 601 VVEPYNATLSVHQLVENTD 657
VV+PYN+ L++ +L N D
Sbjct: 182 VVQPYNSLLTLKRLTLNAD 200
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +2
Query: 353 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 478
GAGNNWA G Y +G + + ++D++ +EA+ D L+GF L H
Sbjct: 99 GAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCH 139
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 31.1 bits (67), Expect = 0.68
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 234
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 235 GKYVPRASSSXLEP--GTMDS 291
Y PR S L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.7 bits (66), Expect = 0.90
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 401 LVDSVLDVVRKEAESCDCLQGF 466
+++SV VVRKEAE+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At5g53905.1 68418.m06707 expressed protein
Length = 168
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -3
Query: 402 SSAPSV*CPLAQLLPAPVLSEDEVVRTEDLSERSRADRVHGAGLQ 268
SSAP+ P ++PAP SED+ R S SR VH GL+
Sbjct: 88 SSAPAHTTPQLPVIPAPDASEDDRSRQ---SRSSRTVMVHQPGLR 129
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 476 VSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSC 363
VS G+PG HT P ++ ++ +++ P S PW SC
Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172
>At3g19570.2 68416.m02482 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -3
Query: 450 SHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPVLS 343
SH + + TT+ + STSS+ SV ++ P+P+LS
Sbjct: 57 SHSTTTTTTTATSTSTSSSSSVILRSSKRYPSPLLS 92
>At3g19570.1 68416.m02481 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 627
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -3
Query: 450 SHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPVLS 343
SH + + TT+ + STSS+ SV ++ P+P+LS
Sbjct: 57 SHSTTTTTTTATSTSTSSSSSVILRSSKRYPSPLLS 92
>At2g37820.1 68415.m04643 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 290
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 282 HGLCPLWTFRTDLPSGQLRLRTVPAPATTGPRDTT 386
HG C W +R +L + + + A T P D T
Sbjct: 146 HGPCQSWRYRCELCRFDIHMECILAVCNTSPSDQT 180
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -3
Query: 237 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 58
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -1
Query: 413 LNRRAQHPPCSVPWPSCCRRRYCPKTKLSGRKICPKGPERTESMVPGSKXDE 258
+ RRA PP P P C R PKTK S + + ++T ++ PGS DE
Sbjct: 51 MRRRAPPPPPPPPLPRPCSRP--PKTKCSLKPL--HWVKKTRAL-PGSLWDE 97
>At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 399
Score = 27.5 bits (58), Expect = 8.4
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = -3
Query: 264 RRGCAGHVLAAGGFI--VVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAAL-- 97
R+ H++ + F+ ++ L Q V +GT GV+ + D+LP S D VA L
Sbjct: 8 RKSPTSHMVFSSFFLSFLLVFSILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATLLK 65
Query: 96 ----TSLDMYDFPHFVL 58
+ +YD H VL
Sbjct: 66 SAKIRNTRIYDADHSVL 82
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 73 EIVHIQAGQCGNQIGAKFWEIISD 144
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,650,789
Number of Sequences: 28952
Number of extensions: 275023
Number of successful extensions: 856
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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