Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0596
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK097411-1|BAC05040.1| 656|Homo sapiens protein ( Homo sapiens ... 31 2.7
BC011375-1|AAH11375.1| 989|Homo sapiens THRAP4 protein protein. 31 4.8
AF277379-1|AAF78764.1| 989|Homo sapiens vitamin D receptor-inte... 31 4.8
AF055995-1|AAC39855.1| 989|Homo sapiens thyroid hormone recepto... 31 4.8
BC037300-1|AAH37300.1| 399|Homo sapiens KIAA1737 protein. 30 6.3
AB051524-1|BAB21828.1| 400|Homo sapiens KIAA1737 protein protein. 30 6.3
BC133012-1|AAI33013.1| 135|Homo sapiens FLJ40142 protein protein. 30 8.3
BC133010-1|AAI33011.1| 135|Homo sapiens FLJ40142 protein protein. 30 8.3
AK097461-1|BAC05063.1| 135|Homo sapiens protein ( Homo sapiens ... 30 8.3
>AK097411-1|BAC05040.1| 656|Homo sapiens protein ( Homo sapiens
cDNA FLJ40092 fis, clone TESTI2003756. ).
Length = 656
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 91 SMATITMKPEYPPSEVYSTSEPPPAYRHRVSTSVQIAKIAALTVVASS 234
S A ++ K PP ++S+S+P PA + + Q+ + T A+S
Sbjct: 28 STAPVSGKKHRPPGPLFSSSDPLPATSYHSRDTAQVTSLIPATFTAAS 75
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 91 SMATITMKPEYPPSEVYSTSEPPPAYRHRVSTSVQIAKIAALTVVASS 234
S A ++ K PP ++S+S+P PA S Q+ + T A+S
Sbjct: 299 STAPVSGKKHRPPGPLFSSSDPLPATSSHSRDSAQVTSLIPATFTAAS 346
>BC011375-1|AAH11375.1| 989|Homo sapiens THRAP4 protein protein.
Length = 989
Score = 30.7 bits (66), Expect = 4.8
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 210 STNSGRFLLHLGNLYLASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPLP 389
S+ R LLH+ L ASSW A S +L ++ A L L +A L+ P
Sbjct: 170 SSTKNRALLHIAKLEEASSWTAIEHSLLKLGEILANLSNP-QLRSQAEQCGTLIRSIPTM 228
Query: 390 LA-NAHALH--GVPPMLSSVLPE 449
L+ +A +H G P + + +L E
Sbjct: 229 LSVHAEQMHKTGFPTVHAVILLE 251
>AF277379-1|AAF78764.1| 989|Homo sapiens vitamin D
receptor-interacting protein complex component DRIP100
protein.
Length = 989
Score = 30.7 bits (66), Expect = 4.8
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 210 STNSGRFLLHLGNLYLASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPLP 389
S+ R LLH+ L ASSW A S +L ++ A L L +A L+ P
Sbjct: 170 SSTKNRALLHIAKLEEASSWTAIEHSLLKLGEILANLSNP-QLRSQAEQCGTLIRSIPTM 228
Query: 390 LA-NAHALH--GVPPMLSSVLPE 449
L+ +A +H G P + + +L E
Sbjct: 229 LSVHAEQMHKTGFPTVHAVILLE 251
>AF055995-1|AAC39855.1| 989|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP100
protein.
Length = 989
Score = 30.7 bits (66), Expect = 4.8
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 210 STNSGRFLLHLGNLYLASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPLP 389
S+ R LLH+ L ASSW A S +L ++ A L L +A L+ P
Sbjct: 170 SSTKNRALLHIAKLEEASSWTAIEHSLLKLGEILANLSNP-QLRSQAEQCGTLIRSIPTM 228
Query: 390 LA-NAHALH--GVPPMLSSVLPE 449
L+ +A +H G P + + +L E
Sbjct: 229 LSVHAEQMHKTGFPTVHAVILLE 251
>BC037300-1|AAH37300.1| 399|Homo sapiens KIAA1737 protein.
Length = 399
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +3
Query: 390 LANAHALHGVPPMLSSVLPETSQPSSSRPSLFKDDALNHASP 515
LA AL GVP +++ P+T QP SS + K +L ASP
Sbjct: 222 LAEDSALQGVPSLVAGGSPQTLQPVSS-SHVAKAPSLTFASP 262
>AB051524-1|BAB21828.1| 400|Homo sapiens KIAA1737 protein protein.
Length = 400
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +3
Query: 390 LANAHALHGVPPMLSSVLPETSQPSSSRPSLFKDDALNHASP 515
LA AL GVP +++ P+T QP SS + K +L ASP
Sbjct: 223 LAEDSALQGVPSLVAGGSPQTLQPVSS-SHVAKAPSLTFASP 263
>BC133012-1|AAI33013.1| 135|Homo sapiens FLJ40142 protein protein.
Length = 135
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 400 PTLCMEYRPCCLQCYLRRASRHLHDPVSS 486
P C++ CCL C L +ASR +H V S
Sbjct: 31 PDGCVQSWRCCLPCDLGQASRFIHTTVCS 59
>BC133010-1|AAI33011.1| 135|Homo sapiens FLJ40142 protein protein.
Length = 135
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 400 PTLCMEYRPCCLQCYLRRASRHLHDPVSS 486
P C++ CCL C L +ASR +H V S
Sbjct: 31 PDGCVQSWRCCLPCDLGQASRFIHTTVCS 59
>AK097461-1|BAC05063.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ40142 fis, clone TESTI2012922. ).
Length = 135
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 400 PTLCMEYRPCCLQCYLRRASRHLHDPVSS 486
P C++ CCL C L +ASR +H V S
Sbjct: 31 PDGCVQSWRCCLPCDLGQASRFIHTTVCS 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,525,831
Number of Sequences: 237096
Number of extensions: 2051451
Number of successful extensions: 5932
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5931
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -