Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0595
         (677 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0514 + 18465474-18465760,18465888-18465978,18466670-184667...    29   3.4  
09_03_0158 - 12878690-12879687,12880115-12880178,12880580-12880645     29   3.4  
06_03_0533 - 21849923-21850231,21851612-21852121                       29   4.5  
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476...    28   7.9  

>10_08_0514 +
           18465474-18465760,18465888-18465978,18466670-18466767,
           18466852-18466949,18468192-18468321,18468410-18468597,
           18470291-18470323,18470627-18471000,18471116-18471294,
           18471421-18471532,18471655-18471771,18471875-18472189,
           18472405-18472743
          Length = 786

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 484 LAKDFQYFGSQQKRQTASSLSSVIWSR 564
           LAK +Q F  +  +QTA+  + V+W+R
Sbjct: 669 LAKAYQVFHDEHFKQTAAEAAEVVWNR 695


>09_03_0158 - 12878690-12879687,12880115-12880178,12880580-12880645
          Length = 375

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 654 PXYLAGKVPRGRCFSCHQI 598
           P Y+ GK+ R  C  CHQ+
Sbjct: 88  PIYIDGKLARAECMHCHQV 106


>06_03_0533 - 21849923-21850231,21851612-21852121
          Length = 272

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -2

Query: 646 SCRKSAPWAMFFLSPDRMISAVISTLXSG-TK*PTI 542
           +CRK A  ++FF++P++   + ++ L SG  K PT+
Sbjct: 144 TCRKLAQESVFFITPEQFYQSHLTPLQSGCCKPPTV 179


>08_02_0733 + 20546072-20546325,20546924-20547017,20547441-20547624,
            20547722-20547831,20548328-20548423,20548525-20548679,
            20548743-20548986,20549159-20549314,20549600-20549829,
            20552213-20552316,20552420-20552505,20552776-20553066,
            20553383-20553475,20553640-20553735,20553838-20553939,
            20554196-20554266,20554784-20555035,20555786-20556529,
            20557038-20557119,20557192-20557347,20557446-20557655,
            20558282-20558665
          Length = 1397

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 20/53 (37%), Positives = 26/53 (49%)
 Frame = +1

Query: 412  SKAKTQQAKLRFKLLEGKEVSVQXLAKDFQYFGSQQKRQTASSLSSVIWSRXR 570
            S AK+Q  KL  +L +    S   L          +K + ASS SSV+WSR R
Sbjct: 1010 SAAKSQDNKLATQLNQ----STDSLLSSTPPLKKLRKSEEASSNSSVVWSRNR 1058


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,077,179
Number of Sequences: 37544
Number of extensions: 333369
Number of successful extensions: 667
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)