Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0595
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49127-1|CAA88944.1|  333|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U15420-1|AAA67063.1|  333|Caenorhabditis elegans lactate dehydro...    29   3.0  
L43563-1|AAC41613.1|  333|Caenorhabditis elegans L-lactate dehyd...    29   3.0  
Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical pr...    28   5.3  

>Z49127-1|CAA88944.1|  333|Caenorhabditis elegans Hypothetical
           protein F13D12.2 protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 573 VDXTADIILSGDKKNIAHGALFLQDXLVKATTDY 674
           VD  AD  L G+  ++ HG  F +   VKA TDY
Sbjct: 51  VDVVADK-LKGEMMDLQHGLAFTRHCTVKADTDY 83


>U15420-1|AAA67063.1|  333|Caenorhabditis elegans lactate
           dehydrogenase protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 573 VDXTADIILSGDKKNIAHGALFLQDXLVKATTDY 674
           VD  AD  L G+  ++ HG  F +   VKA TDY
Sbjct: 51  VDVVADK-LKGEMMDLQHGLAFTRHCTVKADTDY 83


>L43563-1|AAC41613.1|  333|Caenorhabditis elegans L-lactate
           dehydrogenase protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 573 VDXTADIILSGDKKNIAHGALFLQDXLVKATTDY 674
           VD  AD  L G+  ++ HG  F +   VKA TDY
Sbjct: 51  VDVVADK-LKGEMMDLQHGLAFTRHCTVKADTDY 83


>Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical
           protein T12D8.3 protein.
          Length = 274

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -1

Query: 479 WTLTSLPSRSLNLNLACWVFALLCTSTVPSKSITFTNGVWAKKTNLVG 336
           W   S  SRS  +   C + A L TS  P       +G+W K  + +G
Sbjct: 86  WLANSQMSRSRAMEAYCELMAQLDTSWDPDAETVKKSGLWEKMPSTMG 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,262,864
Number of Sequences: 27780
Number of extensions: 277691
Number of successful extensions: 638
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)