Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0594
         (654 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    46   6e-04
UniRef50_UPI00015B60AE Cluster: PREDICTED: hypothetical protein;...    34   2.6  
UniRef50_UPI0000DB783C Cluster: PREDICTED: hypothetical protein;...    34   2.6  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 46.4 bits (105), Expect = 6e-04
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +2

Query: 425 IYGTGGCLTPISGSRARFQLSGNSGRKHAAAAQAYYGNLV 544
           IYGTGG LTPI      F  +G +    AAAAQAYYGN+V
Sbjct: 17  IYGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVV 56


>UniRef50_UPI00015B60AE Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 101

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -3

Query: 538 ISVVCLCSSGVLPAAIPAELKPSTGAT-YGSQTXPSAI 428
           +++V +CS+G++PAA+PA L   T AT Y +     AI
Sbjct: 10  VALVAVCSAGIVPAAVPAALTVGTYATSYNAHAINHAI 47


>UniRef50_UPI0000DB783C Cluster: PREDICTED: hypothetical protein;
           n=2; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 96

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -3

Query: 532 VVCLCSSGVLPAAIPAELKPSTGATYGSQTXPSAIYYSTADRVYH 398
           +V  CS+G++PAA+PA +  +  A + +   P+A+   T    Y+
Sbjct: 13  LVAACSAGLIPAAVPAAVPAAVPAAFAAAPVPAALTVGTYATSYN 57


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,571,571
Number of Sequences: 1657284
Number of extensions: 5941561
Number of successful extensions: 13493
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13491
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)