Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0590
         (508 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0101 + 41086735-41086809,41088634-41088721,41089727-410899...    33   0.13 
08_02_0731 - 20483518-20484154,20484182-20484375,20484541-204846...    27   8.7  

>01_07_0101 +
           41086735-41086809,41088634-41088721,41089727-41089923,
           41090077-41090266,41090469-41090860,41091390-41091965
          Length = 505

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 19/31 (61%), Positives = 19/31 (61%)
 Frame = -3

Query: 125 SPSLRERRCARSSRAGXMSTSXXGDSPRRDG 33
           SP LR R  ARSSRA    TS  GDS RR G
Sbjct: 416 SPDLR-REAARSSRAEVSRTSSTGDSGRRSG 445


>08_02_0731 -
           20483518-20484154,20484182-20484375,20484541-20484640,
           20485282-20485622
          Length = 423

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 104 RCARSSRA-GXMSTSXXGDSPRRDGSMVPSSFTL 6
           RC RS+ A G ++ +    SP  D + +PSSF L
Sbjct: 28  RCIRSNSASGALAATRSASSPWPDPARLPSSFLL 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,937,058
Number of Sequences: 37544
Number of extensions: 107220
Number of successful extensions: 322
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)