Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0588
         (369 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16KA1 Cluster: Putative uncharacterized protein; n=1; ...    32   3.8  
UniRef50_A5AK89 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  

>UniRef50_Q16KA1 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1003

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -1

Query: 216 HLTTASNGSDSSSRGTEYSTTCRTARRXYSKARMACDTGXKAS 88
           H++++ +GSDS +  +      R  R  Y K RMA  TG  AS
Sbjct: 297 HISSSESGSDSETSDSPSLLRERHLREKYKKRRMAVGTGKPAS 339


>UniRef50_A5AK89 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 596

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
 Frame = -1

Query: 357 KPAVXRRGXKLNXRXTS-ILVRGAXXGNGDSVTSNAIAVLIWVWRXTDHLTTASNGSDSS 181
           +P   RRG     R  S   + G   G    V + A+A ++ +     H T+++ G  + 
Sbjct: 104 RPRGTRRGTGGGTRPMSWTRLMGTMQGPAACVMARAMARVVCLGSTRGHHTSSARGHHAR 163

Query: 180 SRGTEYSTTCRTARRXYSKARMACDTGXKASW 85
            RGT + T   T R     +   C     ASW
Sbjct: 164 PRGTHHGTGGGTRRMSCLGSVAQCRAPRHASW 195


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,949,569
Number of Sequences: 1657284
Number of extensions: 2974886
Number of successful extensions: 6371
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6369
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)