Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0580
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    25   0.48 
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   1.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.9  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   7.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   7.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   7.8  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +1

Query: 127 RIAPELYHKMLVVGGLDRVYE--IGRQFRNEGIDLTHNPEFTTCDFTWH 267
           RI PELY + LVV  ++   E  + R   +E  DL          F WH
Sbjct: 250 RITPELYSEHLVVPEIEDNLETSLFRPLSSEATDLRMGVASFCKAFPWH 298


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
          receptor protein.
          Length = 322

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 92 VMNGLAVAPPGTIFISGVSTSRKPILSK 9
          VM  L + P G +     S   KP+L K
Sbjct: 12 VMTSLTLGPAGQVLAGSSSPRPKPLLKK 39


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = +2

Query: 305 NLVWYGTEHSWILQGQISS 361
           N+ WY    +W ++  I S
Sbjct: 54  NITWYNEGQAWNIEANIDS 72


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = +2

Query: 305 NLVWYGTEHSWILQGQISS 361
           N+ WY    +W ++  I S
Sbjct: 54  NITWYNEGQAWNIEANIDS 72


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 614  SDLYTPPPEIQKPIYPRASRWSSVAS 537
            SD+     +  KPI P A+R+  VA+
Sbjct: 1449 SDMLNTRTKGSKPIIPEAARFIEVAT 1474


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 437 QCCHHRYSSKGWCEIDFYFL 378
           Q C  R +S GW   D  FL
Sbjct: 172 QVCSLRMASYGWTTDDLVFL 191


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 437 QCCHHRYSSKGWCEIDFYFL 378
           Q C  R +S GW   D  FL
Sbjct: 172 QVCSLRMASYGWTTDDLVFL 191


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 65  PGTIFISGVSTSRKPIL 15
           P  IF+ GV T   P++
Sbjct: 694 PNVIFLQGVVTKSNPVM 710


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,069
Number of Sequences: 438
Number of extensions: 4099
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)