Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0514
         (618 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86FF0 Cluster: Clone ZZD1374 mRNA sequence; n=2; Schis...    34   3.1  
UniRef50_UPI00015530C3 Cluster: PREDICTED: hypothetical protein;...    33   4.1  
UniRef50_A4C508 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q8TWH8 Cluster: Predicted exporter of the RND superfami...    33   7.2  

>UniRef50_Q86FF0 Cluster: Clone ZZD1374 mRNA sequence; n=2;
           Schistosoma japonicum|Rep: Clone ZZD1374 mRNA sequence -
           Schistosoma japonicum (Blood fluke)
          Length = 163

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 18/75 (24%), Positives = 35/75 (46%)
 Frame = -3

Query: 439 VHVVT*YIPGSWIXNVVHTDCRGHHYAGSGPLSDFSFCVFRFFARLLNNPRIGAQYLLRS 260
           ++++  YIP  W+ +V  T     H+A + P+     C+    +   NN  +     L S
Sbjct: 40  LYIIWAYIPHEWLNSVGVTYLPSKHWAVTAPILSLIICISGLLSYTWNNRSL--MQPLTS 97

Query: 259 MYKLKDIASAFQSES 215
           +Y+++D  S +   S
Sbjct: 98  IYQIRDSYSMYHRNS 112


>UniRef50_UPI00015530C3 Cluster: PREDICTED: hypothetical protein;
           n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
           Mus musculus
          Length = 116

 Score = 33.5 bits (73), Expect = 4.1
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +2

Query: 479 SYFSVRLLYLITSCCQPCSFGENCNLHTYLLS 574
           +++S RLL    SC QPCS  ++C+ HT L++
Sbjct: 37  AWYSSRLLSNPVSCHQPCSHSDDCSDHTCLVT 68


>UniRef50_A4C508 Cluster: Putative uncharacterized protein; n=1;
            Pseudoalteromonas tunicata D2|Rep: Putative
            uncharacterized protein - Pseudoalteromonas tunicata D2
          Length = 2143

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = +2

Query: 290  RIVQQPCEKPKDTEREIAQRTRPRIVMTPAVSMDDIXNPRARDILCNDMYTSDTSKGLRE 469
            RIVQ   +K  + + E  Q   P I MT A+ +    NP   D++ N + T D    + E
Sbjct: 1701 RIVQS--DKSLEQKGEAFQALLPFIEMTAAIVLIKDDNPEIFDVMINAISTDDGQDAIIE 1758

Query: 470  AVTSYF 487
             +  YF
Sbjct: 1759 WIGDYF 1764


>UniRef50_Q8TWH8 Cluster: Predicted exporter of the RND superfamily;
           n=1; Methanopyrus kandleri|Rep: Predicted exporter of
           the RND superfamily - Methanopyrus kandleri
          Length = 716

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = +3

Query: 204 DVHTLSDWKAEAISFSLYIDRSRYWAPILGL 296
           D+ T++   + A++  LY+D  R+WAP+LGL
Sbjct: 191 DLVTVTALVSAAVAAVLYVDFRRWWAPVLGL 221


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,748,117
Number of Sequences: 1657284
Number of extensions: 12073650
Number of successful extensions: 30677
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30671
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)