Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0513
         (637 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    24   1.1  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    24   1.1  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    24   1.1  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    24   1.1  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    24   1.1  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    24   1.1  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    24   1.1  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    24   1.1  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    24   1.1  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   1.9  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   2.5  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    22   4.3  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   5.7  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   5.7  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   5.7  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   5.7  

>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 53  YNFSFKPLYYN 21
           YN ++KPLYYN
Sbjct: 94  YNNNYKPLYYN 104


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 53  YNFSFKPLYYN 21
           YN ++KPLYYN
Sbjct: 94  YNNNYKPLYYN 104


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 53  YNFSFKPLYYN 21
           YN ++KPLYYN
Sbjct: 94  YNNNYKPLYYN 104


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 53  YNFSFKPLYYN 21
           YN ++KPLYYN
Sbjct: 94  YNNNYKPLYYN 104


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 53  YNFSFKPLYYN 21
           YN ++KPLYYN
Sbjct: 327 YNNNYKPLYYN 337


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 53  YNFSFKPLYYN 21
           YN ++KPLYYN
Sbjct: 327 YNNNYKPLYYN 337


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 53  YNFSFKPLYYN 21
           YN ++KPLYYN
Sbjct: 327 YNNNYKPLYYN 337


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 53  YNFSFKPLYYN 21
           YN ++KPLYYN
Sbjct: 327 YNNNYKPLYYN 337


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 53  YNFSFKPLYYN 21
           YN ++KPLYYN
Sbjct: 316 YNNNYKPLYYN 326


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 379 NARNEYVDTTIAKAIDFYTQK 441
           NA  EY  TT+ KAI  YT K
Sbjct: 112 NADGEYGVTTMTKAILHYTGK 132


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -2

Query: 453 ESLSLLSVKVDRFCDRSVDIFVSRVHVEKISSPERV 346
           E  + +  +V  +CDR +     ++ V+ ISSP+ V
Sbjct: 328 EGSNYMQTRVPAWCDRVLLNPTDKMLVQDISSPDAV 363


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 53  YNFSFKPLYYN 21
           YN ++KPL+YN
Sbjct: 327 YNNNYKPLHYN 337


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 333 RFFDIRARGWRSFRREREKRICRHYDRKSDRLLHSKEK 446
           R+   R R   S++ ERE R  R   ++  R    +EK
Sbjct: 38  RYSRSREREQNSYKNEREYRKYRETSKERSRDRKEREK 75


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 333 RFFDIRARGWRSFRREREKRICRHYDRKSDRLLHSKEK 446
           R+   R R   S++ ERE R  R   ++  R    +EK
Sbjct: 38  RYSRSREREQNSYKNEREYRKYRETSKERSRDRKEREK 75


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 333 RFFDIRARGWRSFRREREKRICRHYDRKSDRLLHSKEK 446
           R+   R R   S++ ERE R  R   ++  R    +EK
Sbjct: 38  RYSRSREREQNSYKNEREYRKYRETSKERSRDRKEREK 75


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 220 FWPKLIDDVVQPLQSEFFNFRHGL 149
           F+   +   +QPL++E FN   G+
Sbjct: 309 FFDNFVTVQIQPLKNELFNANIGI 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,684
Number of Sequences: 438
Number of extensions: 3893
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)