Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0512
         (319 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   3.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   4.1  
AM269505-1|CAK30048.1|   10|Tribolium castaneum mlpt peptide 1 p...    19   9.5  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 108 GCRIDQLGYVRFPSFCFIYVNYKL 37
           GC I Q   + F SFC+ Y N K+
Sbjct: 260 GCLI-QFNTIVF-SFCYCYYNSKM 281


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 39  IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEI 134
           I +  + N+++  V I    C N   A+F+E+
Sbjct: 283 IEAKRRDNEIKMFVKIVDASCRNFTAARFFEL 314


>AM269505-1|CAK30048.1|   10|Tribolium castaneum mlpt peptide 1
           protein.
          Length = 10

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 150 GIDPTGAY 173
           G+DPTG Y
Sbjct: 3   GLDPTGLY 10


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,681
Number of Sequences: 336
Number of extensions: 1120
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)