Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0512
(319 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 143 2e-35
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 143 3e-35
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 142 5e-35
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 140 2e-34
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 140 3e-34
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 138 9e-34
03_01_0034 + 318432-318825,318902-319851 133 3e-32
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 132 6e-32
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 61 2e-10
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 60 3e-10
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 57 3e-09
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 52 1e-07
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 42 8e-05
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 34 0.021
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 34 0.028
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 32 0.11
10_01_0300 - 3257584-3258825 32 0.11
08_02_0235 + 14627648-14628889 32 0.11
08_01_0749 + 7063297-7064370 32 0.11
07_01_1086 - 9930311-9931993 32 0.11
05_03_0216 + 10370531-10371922,10378656-10378808 32 0.11
04_01_0187 - 2153546-2154520,2154581-2155858 32 0.11
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454 31 0.26
10_04_0010 - 7487455-7489490,7489569-7489980 31 0.26
03_02_1029 - 13488535-13493037 31 0.26
02_04_0648 - 24716249-24717841 28 1.4
03_02_0514 + 9038606-9039790,9040211-9040432,9040548-9040655,904... 28 1.8
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 27 2.4
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 27 2.4
03_05_0186 + 21731294-21732277 27 3.2
01_03_0211 - 13830871-13831463,13831549-13831915 27 4.2
01_03_0210 + 13825272-13825707,13825794-13826386 27 4.2
05_03_0626 - 16335816-16335917,16336331-16336558,16336694-163369... 26 7.4
01_01_0820 - 6395150-6395769,6395865-6396294 25 9.7
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 143 bits (347), Expect = 2e-35
Identities = 66/84 (78%), Positives = 70/84 (83%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y G SD QLERINVYYNEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
L+DLEPGTM SVRSGPFGQI
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQI 84
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 143 bits (346), Expect = 3e-35
Identities = 65/84 (77%), Positives = 70/84 (83%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREI+HIQ GQCGNQIGAKFWE+I DEHG+D TG Y G SD QLERINVYYNEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
L+DLEPGTM SVRSGPFGQI
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQI 84
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 142 bits (344), Expect = 5e-35
Identities = 65/84 (77%), Positives = 70/84 (83%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y G SD QLERINVYYNEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
L+DLEPGTM SVRSGP+GQI
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQI 84
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 140 bits (340), Expect = 2e-34
Identities = 62/85 (72%), Positives = 71/85 (83%)
Frame = +3
Query: 63 KMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQV 242
KMREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G SD QLER+NVYYNEAS G+
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRF 239
Query: 243 RAPRXLVDLEPGTMXSVRSGPFGQI 317
L+DLEPGTM SVR+GP+GQI
Sbjct: 240 VPRAVLMDLEPGTMDSVRTGPYGQI 264
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 140 bits (338), Expect = 3e-34
Identities = 62/84 (73%), Positives = 70/84 (83%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREI+HIQ GQCGNQIGAKFWE++ DEHGIDPTG Y G SD QLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
L+DLEPGTM SVR+GP+GQI
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQI 84
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 138 bits (334), Expect = 9e-34
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G SD QLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
L+DLEPGTM SVR+GP+GQI
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQI 84
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 133 bits (321), Expect = 3e-32
Identities = 60/84 (71%), Positives = 67/84 (79%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G SD QLER+NVYYNEAS G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
L+DLEPGTM SVRSGP+G I
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGHI 84
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 132 bits (319), Expect = 6e-32
Identities = 60/84 (71%), Positives = 67/84 (79%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREI+HIQ GQCGNQIGAKFWE+I EHG+DPTG Y G S QLERINVY+NEASGG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
L+DLEPGTM S+RSGP G I
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPIGGI 84
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 60.9 bits (141), Expect = 2e-10
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL--ERINVYYNEASGGQ 239
MREI+ I GQ G Q+G WE+ EHGI+P G + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 240 VRAPRXL-VDLEPGTMXSVRSGPFGQI 317
PR + VDLEP + VR+G + Q+
Sbjct: 61 -HVPRAIFVDLEPTVIDEVRTGSYRQL 86
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 60.5 bits (140), Expect = 3e-10
Identities = 29/80 (36%), Positives = 44/80 (55%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVRA 248
REI+ IQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 249 PRXLVDLEPGTMXSVRSGPF 308
LVDLEP + +++ +
Sbjct: 63 RALLVDLEPRVINGIQNSEY 82
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 57.2 bits (132), Expect = 3e-09
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXS--DXQLERINVYYNEASGGQ 239
MRE + I GQ G Q+G WE+ EHGI P G G + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 240 VRAPRXL-VDLEPGTMXSVRSGPFGQI 317
PR + VDLEP + VR+G + Q+
Sbjct: 61 -HVPRAVFVDLEPTVIDEVRTGDYRQL 86
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 51.6 bits (118), Expect = 1e-07
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASG 233
MRE + I GQ G Q+G WE+ EHGI G SD + + N +++E
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQM--PSDRTVGGGDDAFNTFFSETGA 58
Query: 234 GQVRAPRXL-VDLEPGTMXSVRSGPFGQI 317
G+ PR + VDLEP + VR+G + Q+
Sbjct: 59 GK-HVPRAVFVDLEPTVIDEVRTGCYRQL 86
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 42.3 bits (95), Expect = 8e-05
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 167
MREI+ I GQ G Q+G WE+ EHGI P G
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDG 34
Score = 34.3 bits (75), Expect = 0.021
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 198 ERINVYYNEASGGQVRAPRXL-VDLEPGTMXSVRSGPFGQI 317
+ N +++E S G+ PR L VDLEP + V++GP+ Q+
Sbjct: 107 DAFNTFFSETSSGK-HVPRALFVDLEPTVIDEVKTGPYRQL 146
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 34.3 bits (75), Expect = 0.021
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGXSDXQLERIN 209
G+Q +KFW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 33.9 bits (74), Expect = 0.028
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGXSDXQLERIN 209
G+Q +KFW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 31.9 bits (69), Expect = 0.11
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGXSDXQLERIN 209
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 289 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 326
>10_01_0300 - 3257584-3258825
Length = 413
Score = 31.9 bits (69), Expect = 0.11
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGXSDXQLERIN 209
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDRQTERVN 158
>08_02_0235 + 14627648-14628889
Length = 413
Score = 31.9 bits (69), Expect = 0.11
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGXSDXQLERIN 209
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 158
>08_01_0749 + 7063297-7064370
Length = 357
Score = 31.9 bits (69), Expect = 0.11
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGXSDXQLERIN 209
G+Q +KFW+ + E G ++ + AYH +D Q ER+N
Sbjct: 65 GSQFTSKFWQKLQLEMGTRLNFSTAYHPQTDGQTERVN 102
>07_01_1086 - 9930311-9931993
Length = 560
Score = 31.9 bits (69), Expect = 0.11
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGXSDXQLERIN 209
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 268 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 305
>05_03_0216 + 10370531-10371922,10378656-10378808
Length = 514
Score = 31.9 bits (69), Expect = 0.11
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGXSDXQLERIN 209
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 254 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 291
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 31.9 bits (69), Expect = 0.11
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGXSDXQLERIN 209
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 504 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVN 541
>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
Length = 674
Score = 30.7 bits (66), Expect = 0.26
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGXSDXQLERIN 209
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 406 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 443
>10_04_0010 - 7487455-7489490,7489569-7489980
Length = 815
Score = 30.7 bits (66), Expect = 0.26
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGXSDXQLERIN 209
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 568 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 605
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 30.7 bits (66), Expect = 0.26
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 102 GNQIGAKFWEIISDEHG--IDPTGAYHGXSDXQLERIN 209
G+Q + FW+ + +E G ++ + AYH +D Q ER+N
Sbjct: 1208 GSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLN 1245
>02_04_0648 - 24716249-24717841
Length = 530
Score = 28.3 bits (60), Expect = 1.4
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 114 GAKFWEIISDEHGIDPTGAYHG 179
G +++E++ DEHGI+P ++G
Sbjct: 366 GLRYFELMCDEHGIEPEIEHYG 387
>03_02_0514 + 9038606-9039790,9040211-9040432,9040548-9040655,
9041608-9041802,9041905-9042153,9042525-9042672,
9042673-9042779,9043311-9043475,9044506-9045948
Length = 1273
Score = 27.9 bits (59), Expect = 1.8
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = -3
Query: 275 GLQVDXXARGTYLPAGGFIVVYIDALQLXVRXPMVGTGGVDAVLVGDDLPELSSDLVAAL 96
G+++ +RGT P G + AL+ V +G + LV P L+SD VAA
Sbjct: 836 GVRLQAGSRGTVDPWPGAVPT---ALRACAHLADVASGRLIHALVLTR-PALASDAVAAT 891
Query: 95 TSLDMY 78
LDMY
Sbjct: 892 ALLDMY 897
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 155
MRE V +Q G N +G+ FW + G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 155
MRE V +Q G N +G+ FW + G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>03_05_0186 + 21731294-21732277
Length = 327
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 105 NQIGAKFWEIISDEHG--IDPTGAYHGXSDXQLERIN 209
+Q +KFW+ + +E ++ + +YH +D Q ER+N
Sbjct: 122 SQFTSKFWKKLLEEMASKLNFSTSYHPQTDGQTERVN 158
>01_03_0211 - 13830871-13831463,13831549-13831915
Length = 319
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 184 LTXSWSASMYTTMKPPAGKYVPRAXXSTWSP 276
LT + YT KPP K PR W+P
Sbjct: 72 LTNDEFVATYTGAKPPHPKEAPRPVDPIWTP 102
>01_03_0210 + 13825272-13825707,13825794-13826386
Length = 342
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 184 LTXSWSASMYTTMKPPAGKYVPRAXXSTWSP 276
LT + YT KPP K PR W+P
Sbjct: 95 LTNDEFVATYTGAKPPHPKEAPRPVDPIWTP 125
>05_03_0626 -
16335816-16335917,16336331-16336558,16336694-16336973,
16337596-16338560
Length = 524
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 214 TTMKPPAGKYVPRAXXSTWSPAPWXLCALDLSDRS 318
T + P + + PR W+P P C+ LS S
Sbjct: 103 TPLSPSSPPFQPRGLLVRWAPPPAPRCSTPLSPYS 137
>01_01_0820 - 6395150-6395769,6395865-6396294
Length = 349
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 184 LTXSWSASMYTTMKPPAGKYVPRAXXSTWSP 276
LT S +T KPP K PR W P
Sbjct: 93 LTNDEFVSTHTGAKPPCPKDAPRGVDPIWLP 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,551,505
Number of Sequences: 37544
Number of extensions: 154723
Number of successful extensions: 473
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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