Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0512
(319 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 159 5e-40
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 154 2e-38
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 2e-38
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 151 1e-37
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 57 4e-09
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 56 8e-09
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 55 1e-08
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 55 1e-08
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-08
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 3e-08
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 4e-08
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 6e-08
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 48 2e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 3e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 5e-05
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 43 6e-05
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 36 0.005
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 32 0.088
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.9
SB_9321| Best HMM Match : DDE (HMM E-Value=5.40004e-41) 26 5.8
SB_38407| Best HMM Match : DDE (HMM E-Value=5.40004e-41) 26 5.8
SB_6778| Best HMM Match : fn3 (HMM E-Value=0.13) 26 7.6
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.6
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 159 bits (386), Expect = 5e-40
Identities = 74/93 (79%), Positives = 78/93 (83%)
Frame = +3
Query: 39 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYY 218
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHG SD QLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 219 NEASGGQVRAPRXLVDLEPGTMXSVRSGPFGQI 317
NEA+GG+ LVDLEPGTM SVRSGPFGQI
Sbjct: 265 NEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQI 297
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 154 bits (373), Expect = 2e-38
Identities = 70/84 (83%), Positives = 73/84 (86%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHG SD QLERINVYYNEA+GG+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
LVDLEPGTM SVRSGPFGQI
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQI 84
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 154 bits (373), Expect = 2e-38
Identities = 70/84 (83%), Positives = 73/84 (86%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHG SD QLERINVYYNEA+GG+
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
LVDLEPGTM SVRSGPFGQI
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQI 84
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 151 bits (366), Expect = 1e-37
Identities = 68/84 (80%), Positives = 73/84 (86%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHG SD QLERINVYYNEA+GG+
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
L+DLEPGTM SVRSGPFGQI
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQI 84
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 56.8 bits (131), Expect = 4e-09
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASG 233
MRE + I GQ G QIG WE+ EHGI P G SD + + N +++E
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGA 58
Query: 234 GQVRAPRXL-VDLEPGTMXSVRSGPFGQI 317
G+ PR + VDLEP + VR+G + Q+
Sbjct: 59 GK-HVPRAVFVDLEPTVVDEVRTGTYRQL 86
Score = 54.8 bits (126), Expect = 1e-08
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASGG 236
RE + I GQ G QIG WE+ EHGI P G SD + + N +++E G
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGAG 492
Query: 237 QVRAPRXL-VDLEPGTMXSVRSGPFGQI 317
+ PR + VDLEP + VR+G + Q+
Sbjct: 493 K-HVPRAVFVDLEPTVVDEVRTGTYRQL 519
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 55.6 bits (128), Expect = 8e-09
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASG 233
MRE + I GQ G Q+G WE+ EHGI P G SD + + N +++E
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGA 58
Query: 234 GQVRAPRXL-VDLEPGTMXSVRSGPFGQI 317
G+ PR + VDLEP + VR+G + Q+
Sbjct: 59 GK-HVPRAVFVDLEPTVVDEVRTGTYRQL 86
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 55.2 bits (127), Expect = 1e-08
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASG 233
+RE + I GQ G QIG WE+ EHGI P G SD + + N +++E
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGA 643
Query: 234 GQVRAPRXL-VDLEPGTMXSVRSGPFGQI 317
G+ PR + VDLEP + VR+G + Q+
Sbjct: 644 GK-HVPRAVFVDLEPTVVDEVRTGTYRQL 671
Score = 54.4 bits (125), Expect = 2e-08
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASGG 236
RE + + GQ G QIG WE+ EHGI P G SD + + N +++E G
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGAG 123
Query: 237 QVRAPRXL-VDLEPGTMXSVRSGPFGQI 317
+ PR + VDLEP + VR+G + Q+
Sbjct: 124 K-HVPRAVFVDLEPTVVDEVRTGTYRQL 150
Score = 46.4 bits (105), Expect = 5e-06
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASGG 236
RE + I GQ G QIG WE+ EHGI P G SD + + N +++E G
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGAG 571
Query: 237 QVRAPRXL-VDLEP 275
+ PR + VDLEP
Sbjct: 572 K-HVPRAVFVDLEP 584
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 54.8 bits (126), Expect = 1e-08
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASGG 236
RE + I GQ G QIG WE+ EHGI P G SD + + N +++E G
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGAG 58
Query: 237 QVRAPRXL-VDLEPGTMXSVRSGPFGQI 317
+ PR + VDLEP + VR+G + Q+
Sbjct: 59 K-HVPRAVFVDLEPTVVDEVRTGTYRQL 85
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 54.4 bits (125), Expect = 2e-08
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASGG 236
RE V I GQ G Q+G WE+ EHGI P G SD + + N +++E G
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGAG 477
Query: 237 QVRAPRXL-VDLEPGTMXSVRSGPFGQI 317
+ PR + VDLEP + +R+G + Q+
Sbjct: 478 K-HVPRAVFVDLEPSVIDEIRTGTYRQL 504
Score = 37.9 bits (84), Expect = 0.002
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +3
Query: 111 IGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASGGQVRAPRXLV-DLEP 275
+G WE+ EHGI P G SD + + N +++E G+ PR + DLEP
Sbjct: 1 MGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGAGK-HVPRAVFCDLEP 57
Query: 276 GTMXSVRSGPFGQI 317
+ VR+G + Q+
Sbjct: 58 TVVDEVRTGTYRQL 71
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 53.6 bits (123), Expect = 3e-08
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASGG 236
RE + I GQ G QIG WE+ EHGI P G SD + + N ++ E G
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDAFNTFFAETGAG 430
Query: 237 QVRAPRXL-VDLEPGTMXSVRSGPFGQI 317
+ PR + VDLEP + VR+G + Q+
Sbjct: 431 K-HVPRAVFVDLEPTVIDEVRTGTYRQL 457
Score = 51.6 bits (118), Expect = 1e-07
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASGG 236
RE + + GQ G Q+G WE+ EHGI P G SD + + N +++E G
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGAG 863
Query: 237 QVRAPRXL-VDLEPGTMXSVRSGPFGQI 317
+ PR + DLEP + VR+G + Q+
Sbjct: 864 K-HVPRAVFADLEPTVVDEVRTGTYRQL 890
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 53.2 bits (122), Expect = 4e-08
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASG 233
MRE + + GQ G Q+G WE+ EHGI P G SD + + N +++E
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQM--PSDKTIGGGDDSFNTFFSETGS 58
Query: 234 GQVRAPRXL-VDLEPGTMXSVRSGPFGQI 317
G+ PR + DLEP + VR+G + Q+
Sbjct: 59 GK-HVPRAVFCDLEPTVVDEVRTGTYRQL 86
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 52.8 bits (121), Expect = 6e-08
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXS--DXQLERINVYYNEASGGQ 239
MRE + + GQ G QIG WE+ EHGI P G D + N +++E GG+
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 240 VRAPRXL-VDLEPGTMXSVR 296
PR + VDLEP + ++
Sbjct: 61 -HVPRAVFVDLEPSVVGRMK 79
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 47.6 bits (108), Expect = 2e-06
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAY-----HGXSDXQLERINVYYNEAS 230
MRE + I GQ G QIG WE+ EHGI P G G D + N +++E
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGD---DSFNTFFSETG 57
Query: 231 GGQVRAPRXL-VDLEP 275
G+ PR + VDLEP
Sbjct: 58 AGK-HVPRAVFVDLEP 72
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 44.0 bits (99), Expect = 3e-05
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLER----INVYYNEASG 233
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 234 GQ 239
G+
Sbjct: 254 GK 255
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 43.2 bits (97), Expect = 5e-05
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 123 FWEIISDEHGIDPTGAYHG-XSDXQLERINVYYNE 224
FWE+I++EHGIDP G S Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 42.7 bits (96), Expect = 6e-05
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 258 LVDLEPGTMXSVRSGPFGQI 317
LVDLEPGTM SVRSGPFGQI
Sbjct: 10 LVDLEPGTMDSVRSGPFGQI 29
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 228 SGGQVRAPRXLVDLEPGTMXSVRSGPFGQI 317
+GG+ LVDLEPGTM +VR GP G +
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNM 40
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 32.3 bits (70), Expect = 0.088
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 75 IVHIQAGQCGNQIGAKFWEIISDE 146
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 198 ERINVYYNEASGGQVRAPRXL-VDLEPGTMXSVRSGPFGQI 317
+ N ++ E G+ PR + VDLEP + +R+G + Q+
Sbjct: 12 DSFNTFFAETGAGK-HVPRAVFVDLEPTVIDEIRTGTYRQL 51
>SB_9321| Best HMM Match : DDE (HMM E-Value=5.40004e-41)
Length = 700
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 166 PVGSMPCSSEMISQNLAPIWLPH*PAWICT 77
P + PC +++ S+ L IW + AWI T
Sbjct: 273 PTANPPCFAKLDSECLPVIWRANRRAWITT 302
>SB_38407| Best HMM Match : DDE (HMM E-Value=5.40004e-41)
Length = 700
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 166 PVGSMPCSSEMISQNLAPIWLPH*PAWICT 77
P + PC +++ S+ L IW + AWI T
Sbjct: 273 PTANPPCFAKLDSECLPVIWRANRRAWITT 302
>SB_6778| Best HMM Match : fn3 (HMM E-Value=0.13)
Length = 464
Score = 25.8 bits (54), Expect = 7.6
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Frame = +2
Query: 86 PSWSMRQPDRS*VLGDHLRRARHRPHRCLPWGL*LXVGAHQCILQ*SLRRASTCPAXPXR 265
P+ R P + ++ + RH PHR PW +G + + L A P
Sbjct: 337 PTGDARSPTGD-IFRNNSLKCRHMPHRWPPWPTLTRMGLMAALTRMGLVAALAHPHSHGL 395
Query: 266 LGARH-HGL 289
G H HGL
Sbjct: 396 NGRPHSHGL 404
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 219 NEASGGQVRAPRXLVDLEPGTMXSVRSGPF 308
+EA+ G+ LVDLEP + VR+G +
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMY 994
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,126,713
Number of Sequences: 59808
Number of extensions: 159527
Number of successful extensions: 314
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 413004273
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -