Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0512
(319 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 154 2e-38
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 146 3e-36
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 142 5e-35
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 142 5e-35
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 139 5e-34
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 138 1e-33
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 97 2e-21
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 97 2e-21
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 66 5e-12
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 61 1e-10
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 61 1e-10
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 60 3e-10
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 60 3e-10
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 60 4e-10
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 58 2e-09
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 58 2e-09
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 57 3e-09
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 56 6e-09
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 55 1e-08
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 55 1e-08
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 55 1e-08
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 53 4e-08
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 53 4e-08
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 48 1e-06
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 48 1e-06
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 44 3e-05
Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical pr... 26 5.1
AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical ... 26 5.1
AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical ... 26 5.1
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 154 bits (373), Expect = 2e-38
Identities = 70/84 (83%), Positives = 75/84 (89%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+G SD QLERINVYYNEASGG+
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
LVDLEPGTM SVR+GPFGQ+
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQL 84
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 146 bits (354), Expect = 3e-36
Identities = 66/84 (78%), Positives = 71/84 (84%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G SD QLERINVYYNEA+GG+
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
LVDLEPGTM SVRSGPFGQ+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQL 84
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 142 bits (344), Expect = 5e-35
Identities = 65/84 (77%), Positives = 70/84 (83%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y G SD QLERINVYYNEA +
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
LVDLEPGTM SVRSGPFGQ+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQL 84
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 142 bits (344), Expect = 5e-35
Identities = 65/84 (77%), Positives = 70/84 (83%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y G SD QLERINVYYNEA +
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
LVDLEPGTM SVRSGPFGQ+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQL 84
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 139 bits (336), Expect = 5e-34
Identities = 62/84 (73%), Positives = 70/84 (83%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G SD QLERI+VYYNEA+ G+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
LVDLEPGTM SVRSGPFGQ+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQL 84
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 138 bits (333), Expect = 1e-33
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G +D QLERI+VYYNEA+ G+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
LVDLEPGTM SVRSGPFGQ+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQL 84
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 97.1 bits (231), Expect = 2e-21
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y G + QLERI YY E G +
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
LVDL+P ++ VRS +G++
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKL 84
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 97.1 bits (231), Expect = 2e-21
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y G + QLERI YY E G +
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
LVDL+P ++ VRS +G++
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKL 84
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 66.1 bits (154), Expect = 5e-12
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYH---GXSDXQLERINVYYNEASGGQ 239
RE++ I GQ G QIG WE+ EHGI P G YH D + E IN ++ E +GG+
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 240 VRAPRXL-VDLEPGTMXSVRSGPF 308
PR L VDLEP + VR+G +
Sbjct: 67 -HVPRCLFVDLEPTVVDEVRTGTY 89
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 61.3 bits (142), Expect = 1e-10
Identities = 28/84 (33%), Positives = 43/84 (51%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
VDLEP + +R+G + ++
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKL 84
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 61.3 bits (142), Expect = 1e-10
Identities = 28/84 (33%), Positives = 43/84 (51%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
VDLEP + +R+G + ++
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKL 84
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 60.1 bits (139), Expect = 3e-10
Identities = 27/84 (32%), Positives = 41/84 (48%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MRE++ I GQ G QIG WE+ EHGI P G E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
VDLEP + +R+G + ++
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKL 84
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 60.1 bits (139), Expect = 3e-10
Identities = 27/84 (32%), Positives = 41/84 (48%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MRE++ I GQ G QIG WE+ EHGI P G E ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
VDLEP + +R+G + ++
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKL 84
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 59.7 bits (138), Expect = 4e-10
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLE--RINVYYNEASGGQ 239
MREIV I GQ G QIG WE+ EHGI P G + +E N +++E G+
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 240 VRAPRXL-VDLEPGTMXSVRSGPFGQI 317
PR + VDLEP + VR+G + ++
Sbjct: 61 -HVPRAIFVDLEPTVIDEVRTGTYAKL 86
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 57.6 bits (133), Expect = 2e-09
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MRE++ I GQ G QIG WE+ EHGI P G + ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
VDLEP + +R+G + ++
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKL 84
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 57.6 bits (133), Expect = 2e-09
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MRE++ I GQ G QIG WE+ EHGI P G + ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 246 APRXLVDLEPGTMXSVRSGPFGQI 317
VDLEP + +R+G + ++
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKL 84
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 56.8 bits (131), Expect = 3e-09
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 60 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL--ERINVYYNEASG 233
N+ RE++ I GQ G Q+G WE+ EHGI P G + + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 234 GQVRAPRXLVDLEPGTMXSVRSGPF 308
G+ +VDLEP + +R+G +
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTY 88
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 56.0 bits (129), Expect = 6e-09
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGXSDXQLERINVYYNEASGGQVR 245
RE V I GQ G QIG WE+ EHG+D G + + + + +++E+ G+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGK-H 64
Query: 246 APRXL-VDLEPGTMXSVRSGPFGQI 317
PR + VDLEP + +R+G +G +
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNL 89
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 55.2 bits (127), Expect = 1e-08
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASG 233
MRE++ I GQ G QIG WE+ EHGI P G SD L + + +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKSLGGSDDSFSTFFSETGS 58
Query: 234 GQVRAPRXLVDLEPGTMXSVRSGPF 308
G+ +VDLEP + +R+G +
Sbjct: 59 GRHVPRAVMVDLEPTVIDEIRTGTY 83
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 55.2 bits (127), Expect = 1e-08
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASG 233
MRE++ I GQ G QIG WE+ EHGI P G SD L + + +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKSLGGSDDSFSTFFSETGS 58
Query: 234 GQVRAPRXLVDLEPGTMXSVRSGPF 308
G+ +VDLEP + +R+G +
Sbjct: 59 GRHVPRAVMVDLEPTVIDEIRTGTY 83
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 55.2 bits (127), Expect = 1e-08
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASG 233
MRE++ I GQ G QIG WE+ EHGI P G SD L + + +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKSLGGSDDSFSTFFSETGS 58
Query: 234 GQVRAPRXLVDLEPGTMXSVRSGPF 308
G+ +VDLEP + +R+G +
Sbjct: 59 GRHVPRAVMVDLEPTVIDEIRTGTY 83
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 53.2 bits (122), Expect = 4e-08
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 66 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVR 245
MRE++ I GQ G QIG WE+ EHGI P G D + ++++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGR-H 58
Query: 246 APRXL-VDLEPGTMXSVRSGPFGQI 317
PR + VDLEP + +R+G + ++
Sbjct: 59 VPRSIFVDLEPTVVDEIRTGAYKKL 83
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 53.2 bits (122), Expect = 4e-08
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +3
Query: 69 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQL----ERINVYYNEASGG 236
RE++ I GQ G QIG WE+ EHGI P G SD L + + +++E G
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQM--PSDKSLGGSDDSFSTFFSETGSG 58
Query: 237 QVRAPRXLVDLEPGTMXSVRSGPF 308
+ +VDLEP + +R+G +
Sbjct: 59 RHVPRAVMVDLEPTVIDEIRTGTY 82
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 48.4 bits (110), Expect = 1e-06
Identities = 24/77 (31%), Positives = 38/77 (49%)
Frame = +3
Query: 75 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVRAPR 254
++ + GQCGNQ+ FW+ + DEHGI+ G D ++ ++Y +A
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 255 XLVDLEPGTMXSVRSGP 305
LVDLEP + + P
Sbjct: 66 VLVDLEPRVINGMMQSP 82
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 48.4 bits (110), Expect = 1e-06
Identities = 24/77 (31%), Positives = 38/77 (49%)
Frame = +3
Query: 75 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGXSDXQLERINVYYNEASGGQVRAPR 254
++ + GQCGNQ+ FW+ + DEHGI+ G D ++ ++Y +A
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 255 XLVDLEPGTMXSVRSGP 305
LVDLEP + + P
Sbjct: 66 VLVDLEPRVINGMMQSP 82
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 43.6 bits (98), Expect = 3e-05
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 144 EHGIDPTGAYHGXSDX---QLERINVYYNEASGGQVRAPRXL-VDLEPGTMXSVRSGPF 308
EHGI P G YH D + E IN ++ E +GG+ PR L VDLEP + VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK-HVPRCLFVDLEPTVVDEVRTGTY 61
>Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 158 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 57
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 158 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 57
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 158 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 57
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
>AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 158 VDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 57
V V + D+PELS TS +DF H +L
Sbjct: 82 VSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLL 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,615,708
Number of Sequences: 27780
Number of extensions: 107804
Number of successful extensions: 298
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -