Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0511
(628 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0039 - 319871-319914,320021-320084,320198-320263,320397-32... 33 0.19
11_01_0040 - 304439-304482,304589-304652,304766-304831,305509-30... 32 0.32
06_03_1127 - 27807784-27807963,27808362-27808460,27809076-278091... 31 0.75
11_06_0653 + 25911162-25911272,25911648-25911694,25912877-259133... 30 1.3
11_04_0191 - 14692104-14692484 30 1.3
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 30 1.7
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229... 29 2.3
09_06_0294 + 22089915-22091333 29 3.0
07_03_0399 + 17714058-17714163,17714282-17714406,17714868-177149... 29 4.0
11_01_0658 + 5342508-5343602,5343697-5343764,5343994-5344042,534... 28 5.3
03_05_1097 + 30393336-30393578,30393661-30393780,30393859-303940... 28 5.3
02_05_0418 + 28807763-28807777,28809216-28809242,28809588-288096... 28 5.3
02_03_0190 + 16188329-16188514,16188552-16188885,16190275-161907... 28 5.3
09_02_0302 - 7086017-7086124,7086125-7086796,7087511-7088070,708... 28 7.0
06_01_0447 + 3159092-3159543,3159699-3159825,3160640-3161392 27 9.2
05_03_0478 - 14526180-14526578 27 9.2
03_05_0559 - 25610474-25610951,25611149-25611890,25612355-256127... 27 9.2
03_05_0290 - 22791338-22791925,22792012-22793196,22793835-227939... 27 9.2
01_01_0956 + 7505206-7505322,7505860-7506723,7506841-7507260,750... 27 9.2
>12_01_0039 -
319871-319914,320021-320084,320198-320263,320397-320458,
321211-321298,321401-321461,321542-321625,322332-322630
Length = 255
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = -3
Query: 485 EGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTVEIGHEIGALA 306
+GFAK F++ SD+ + L+K+ RGG++ S T + E G + A+
Sbjct: 124 KGFAKFFKESSDEERDHAEKLMKYQNMRGGRVRLQSIVTPLTEFDH---PEKGDALYAME 180
Query: 305 KALDTQKQLAERIFFIH 255
AL +K + E++ +H
Sbjct: 181 LALALEKLVNEKLHNLH 197
>11_01_0040 -
304439-304482,304589-304652,304766-304831,305509-305640,
305744-305804,305885-306018,306310-306654
Length = 281
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 485 EGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTT 369
+GFAK F++ SD+ + LIK+ RGG++ S T
Sbjct: 156 KGFAKFFKESSDEERDHAEKLIKYQNMRGGRVRLQSIVT 194
>06_03_1127 -
27807784-27807963,27808362-27808460,27809076-27809165,
27809272-27809404,27809539-27809624,27810028-27810099,
27810329-27810415,27810485-27810616,27810718-27810789,
27810957-27811037,27811871-27811963,27812298-27812465
Length = 430
Score = 31.1 bits (67), Expect = 0.75
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 210 TQYIEEEFVSQQADTIRSLAGHTSDXKRFITENNGKDLSLAVYLFDEYL 64
T Y +S + LAGHT+D E G++L LA L D+ L
Sbjct: 272 TYYKTASLISNSCKAVAILAGHTADVSMLAYE-YGRNLGLAFQLIDDVL 319
>11_06_0653 +
25911162-25911272,25911648-25911694,25912877-25913355,
25914089-25914249,25914324-25914519,25914745-25914807,
25914898-25915047,25915148-25915494
Length = 517
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 530 LSPVGLLLNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGG 396
+ VG L+ Y + E K+ K+SD WE I + T R G
Sbjct: 247 IKTVGDFLSFYDRSPEDLRKILGKISDQDWETIISHAQKCTPRPG 291
>11_04_0191 - 14692104-14692484
Length = 126
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Frame = -2
Query: 441 GENHWSHKARH*EGWE-----DGLLESHHTERRQGQQLHRRDRPRDRSPGQSLGHAEAAC 277
G+ W + W DG+ +H ERR + R R R+R G SLG AA
Sbjct: 21 GKQRWRQRRSRPTRWRSTELRDGVEMAHGDERRTPELRWREKRQRERERGLSLGALPAAA 80
Query: 276 RED 268
+
Sbjct: 81 ARE 83
>01_01_1018 -
8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -2
Query: 246 TKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGHTSDXKRFITENN 109
T N DL H A+I YI E + ++ GHTSD + F E +
Sbjct: 269 TGNRDLYH-AQIHPYINGEHKRDRCIQMKEKLGHTSDHEGFSREKS 313
>02_04_0221 -
21021886-21022144,21022227-21022345,21022681-21022920,
21023064-21023171,21023272-21023331,21023991-21024066,
21024155-21024360,21024722-21024784,21024925-21025012,
21025515-21026015,21027206-21027603
Length = 705
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -2
Query: 423 HKARH*EGWEDGLLESHHTERRQGQQLHRRDRPRDRSPGQSLGHA-EAACREDF-LHPRE 250
++ H + +E ES ++ R + RPR SPG GHA A C DF PR
Sbjct: 181 NEVHHMQIFEPSTSESSYSRGRMLPEDTFAVRPRSHSPGPR-GHAYSACCARDFGFTPRS 239
Query: 249 VTKNSD 232
K D
Sbjct: 240 PVKRMD 245
>09_06_0294 + 22089915-22091333
Length = 472
Score = 29.1 bits (62), Expect = 3.0
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 310 WPKPWTRRSSLPRGFSSSTGSH 245
WP PW S+ G+ ++TG H
Sbjct: 192 WPAPWIELSTTGLGYDTATGEH 213
>07_03_0399 +
17714058-17714163,17714282-17714406,17714868-17714983,
17715058-17715151,17715255-17715319,17716295-17716400,
17716776-17716805,17716877-17716990,17717741-17717803
Length = 272
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = -3
Query: 536 LPLSPVGLLLNNYQTNREGFAKLF----RKLSDDSWEKTIGLIKHVTKRGGK-MDFSSHT 372
L L V + +N + +G A L +KLS+D+WEK + L + K F T
Sbjct: 175 LTLEKVNIAINEVASYADGNAHLVACPKKKLSEDTWEKALELRDIAARESVKGRHFFLET 234
Query: 371 TLKG 360
+KG
Sbjct: 235 DIKG 238
>11_01_0658 +
5342508-5343602,5343697-5343764,5343994-5344042,
5344217-5344333,5344438-5344506,5344631-5344725,
5345580-5345658,5346499-5346563,5347368-5347461,
5347675-5347744,5348363-5349357
Length = 931
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/71 (23%), Positives = 31/71 (43%)
Frame = -2
Query: 384 LESHHTERRQGQQLHRRDRPRDRSPGQSLGHAEAACREDFLHPREVTKNSDLLHDAEITQ 205
L+ +++Q QQL R+ R+PG+S + C + H +N ++ E +
Sbjct: 314 LQQQQQQQQQQQQLLRQQSLNMRTPGKSAPYEPGTCAKRLTHYMYHQQNRPQDNNIEYWR 373
Query: 204 YIEEEFVSQQA 172
E+ S A
Sbjct: 374 NFVNEYFSPNA 384
>03_05_1097 +
30393336-30393578,30393661-30393780,30393859-30394017,
30394184-30394225,30394336-30394508,30394600-30394705,
30394795-30394824
Length = 290
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -1
Query: 622 CSAYYGQFKDNHVVANELKALASLYLKRSYHYLLSASYSTTTR 494
CSA+Y + +HV + + R+ HYL + TTR
Sbjct: 36 CSAFYNPVEGHHVQKPHIVPSCKVNFTRASHYLYRSLSERTTR 78
>02_05_0418 +
28807763-28807777,28809216-28809242,28809588-28809621,
28809909-28810154,28810518-28810948,28812759-28813418
Length = 470
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 313 PWPKPWTRRSSLPRGFSSSTGSH*KQRPPPR 221
P+PKP RR PRG + + + + PPP+
Sbjct: 353 PFPKPVPRRGGAPRGKAWESFAAAGKEPPPK 383
>02_03_0190 +
16188329-16188514,16188552-16188885,16190275-16190745,
16191055-16191249,16191519-16191643,16192082-16192142,
16192774-16193023,16193129-16193279,16193594-16193902
Length = 693
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/79 (22%), Positives = 30/79 (37%)
Frame = -3
Query: 593 QPRCSERTEGISLTVFETFLPLSPVGLLLNNYQTNREGFAKLFRKLSDDSWEKTIGLIKH 414
Q CSE E I + + + S G + GF K+++ L D E + +
Sbjct: 394 QSSCSEEVEDIKSVLLDPSVIRSATGNFAEENKLGEGGFGKVYKGLMPDGQEIAVKRLAK 453
Query: 413 VTKRGGKMDFSSHTTLKGD 357
+K+ +D L D
Sbjct: 454 GSKQDLNIDDKKREQLAWD 472
>09_02_0302 -
7086017-7086124,7086125-7086796,7087511-7088070,
7088754-7089131,7089357-7089821,7090022-7090127,
7090219-7090294,7090407-7090648,7090824-7090904,
7091013-7091205,7091336-7091558,7091611-7091646,
7091694-7091790
Length = 1078
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -1
Query: 598 KDNHVVANELKALASLYLKRSYHYLLSASYSTTTRRTGKDSRSS---SGN 458
K N + + L+LKR +L YS TT+ T ++SR S SGN
Sbjct: 77 KPNEELKSPFLVKRHLFLKRPDPIILDELYSLTTKVTDEESRQSVWVSGN 126
>06_01_0447 + 3159092-3159543,3159699-3159825,3160640-3161392
Length = 443
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = -2
Query: 435 NHWSHKARH*EGWEDGLLESHHTERRQGQQLHRRDRPRDRSP 310
N W+ A+H G + +++H ++ Q RR R ++P
Sbjct: 214 NKWAEIAKHLPGRTENSIKNHWNATKRRQFARRRSRASSKNP 255
>05_03_0478 - 14526180-14526578
Length = 132
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -2
Query: 381 ESHHTERRQGQQLHRRDRPRDRSPG---QSLGHAEAA 280
+ + RR+GQ+ HRR RPR + G +++ H +A
Sbjct: 70 DGYRGARRRGQEDHRRRRPRRHAVGAAAEAINHGGSA 106
>03_05_0559 -
25610474-25610951,25611149-25611890,25612355-25612744,
25613041-25613099,25613186-25613326,25613449-25613545,
25614999-25615185
Length = 697
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = -2
Query: 342 HRRDRPRDRSPGQSLGHAEAACREDFLHPRE-VTKNSDLLHDAEITQYIEEEFVSQQADT 166
H R R R R P + + + A E+FL + +NS +L Q E+ + +
Sbjct: 39 HGRGRTRGRGPREDIVLSNAQTGEEFLDENAMIPQNSTVLVRRTSGQQSEKIVLFSSREV 98
Query: 165 IRSLAGHTSDXKRFITENNGKDLS 94
I G + K ITE+ K S
Sbjct: 99 IED--GAIASNKSEITESTSKSCS 120
>03_05_0290 -
22791338-22791925,22792012-22793196,22793835-22793904,
22795918-22795979
Length = 634
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 288 EAACREDFLHPREVTKNSDLLHDAEITQYIEEEFVSQQADT 166
+ A D L P ++N+ L++ + I EEFVS+Q+DT
Sbjct: 324 DGASVSDLLIPANTSENT--LYNVNLIIAIVEEFVSRQSDT 362
>01_01_0956 +
7505206-7505322,7505860-7506723,7506841-7507260,
7508091-7508342,7508696-7508953,7509798-7509877,
7509959-7510070,7510492-7510541,7511070-7511171,
7511215-7511276,7511888-7511928
Length = 785
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 356 KGSNYTVEIGHEIGALAKALDTQKQLAERIFFIHG 252
KG N I ++ G K LDT + +RI FI G
Sbjct: 431 KGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISG 465
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,971,914
Number of Sequences: 37544
Number of extensions: 328349
Number of successful extensions: 916
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -