Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0511
(628 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.047
SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18) 34 0.082
SB_8363| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 31 0.77
SB_15649| Best HMM Match : EF1_GNE (HMM E-Value=0.025) 28 5.4
SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3) 28 5.4
SB_42516| Best HMM Match : EF1_GNE (HMM E-Value=3.3e-05) 28 5.4
SB_38385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17) 28 5.4
SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 28 7.1
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = -2
Query: 222 DAEITQYIEEEFVSQQADTIRSLAGHTSDXKR 127
DA++T +IE F+++Q + I+ LAGH ++ KR
Sbjct: 309 DAQMTDFIEGNFLTEQVEAIKELAGHLTNLKR 340
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 35.1 bits (77), Expect = 0.047
Identities = 13/42 (30%), Positives = 30/42 (71%)
Frame = -2
Query: 252 EVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGHTSDXKR 127
E+ K ++ DA+++ +IE+ F+++Q ++IR L+G+ + K+
Sbjct: 94 ELEKTAEKNGDAQMSDFIEDHFLTEQVESIRELSGYIAVLKK 135
>SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18)
Length = 88
Score = 34.3 bits (75), Expect = 0.082
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = -2
Query: 225 HDAEITQYIEEEFVSQQADTIRSLAGHTSDXKRFITENNGK 103
+DA++ +IEE F+++Q D+I+ L+ + S +R E G+
Sbjct: 39 NDAQMQDFIEETFLNEQMDSIKQLSNYVSTLRRLGGEGLGE 79
>SB_8363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 31.5 bits (68), Expect = 0.58
Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 4/110 (3%)
Frame = -2
Query: 372 HTERRQGQQLHRRDRPRDRSPGQSLGHAEAACREDFLHPREVTKNSDLLHDAEITQYIEE 193
HT +HR R S+GH ++ CR +H V ++ + T Y+
Sbjct: 335 HTSYVSRSVIHRLSVDRSYIVCLSIGHTQSVCR-SVIHRMSVDRSYIVCQSIGYTSYVSR 393
Query: 192 EFVSQ----QADTIRSLAGHTSDXKRFITENNGKDLSLAVYLFDEYLQKV 55
+ + ++ T+ GHTS R + D S V Y V
Sbjct: 394 SVIHRLSVDRSYTVSPSIGHTSSVCRSVIHRLSVDRSYIVCRSISYTSSV 443
Score = 27.9 bits (59), Expect = 7.1
Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 4/110 (3%)
Frame = -2
Query: 372 HTERRQGQQLHRRDRPRDRSPGQSLGHAEAACREDFLHPREVTK----NSDLLHDAEITQ 205
HT+ + +HR R S+GH ++ CR +H V + + H + + +
Sbjct: 257 HTQSPRRSVIHRLSVDRSYIVCLSIGHTQSVCR-SVIHRMSVDRLYIVCQSIGHTSSVCR 315
Query: 204 YIEEEFVSQQADTIRSLAGHTSDXKRFITENNGKDLSLAVYLFDEYLQKV 55
+ ++ + GHTS R + D S V L + Q V
Sbjct: 316 SVIHSLPVDRSYIVCLSIGHTSYVSRSVIHRLSVDRSYIVCLSIGHTQSV 365
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 31.1 bits (67), Expect = 0.77
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Frame = -2
Query: 255 REVTKNSDLLHDAEITQYIE--------EEFVSQQADTIRSLAGHTSDXKRFITENNG 106
+EVT N+ L D +TQ E EE+V + IR + T KR+IT++NG
Sbjct: 182 QEVT-NAVTLQDQPVTQSFEPTSEEEKVEEYVDEYGHVIRCITRRTLVIKRYITDDNG 238
>SB_15649| Best HMM Match : EF1_GNE (HMM E-Value=0.025)
Length = 301
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/26 (42%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = +1
Query: 220 IVEEVAVFSDFPWMK-KILSASCFCV 294
+++++ F DFP+MK ++L +SCF V
Sbjct: 29 LIDKLCEFEDFPYMKNQLLPSSCFRV 54
>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = -2
Query: 426 SHKARH*EGWEDGLLESHHTERRQGQQLHRRDRPRDRSPGQSLGHAEAACREDFLHPREV 247
S + RH +G E + H R ++ RRDR RDR S RE
Sbjct: 326 SSEHRHRDGRESWREKPKHRRRSHEEREQRRDRFRDRDEKGSDLERRDGRREAMKASNRE 385
Query: 246 TKNSDLLHDAEI 211
+ +DLL + +
Sbjct: 386 NRTADLLENKTV 397
>SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3)
Length = 769
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 327 PRDRSPGQSL-GHAEAACREDFLHPREVTKN 238
PRD S G+SL G A+A+CR RE KN
Sbjct: 630 PRDTSTGRSLGGSADASCRTPRDRSRENGKN 660
>SB_42516| Best HMM Match : EF1_GNE (HMM E-Value=3.3e-05)
Length = 416
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/26 (42%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = +1
Query: 220 IVEEVAVFSDFPWMK-KILSASCFCV 294
+++++ F DFP+MK ++L +SCF V
Sbjct: 144 LIDKLCEFEDFPYMKNQLLPSSCFRV 169
>SB_38385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -1
Query: 262 SSTGSH*KQRPPPRC*DHSIHRGGIRESASRYDS*PRGSH 143
+ TG H + P H R G ESA RYD RG+H
Sbjct: 12 TQTGDHDAESPETPSDGHGSARPGTTESAGRYD---RGTH 48
>SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1670
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 327 PRDRSPGQSL-GHAEAACREDFLHPREVTKN 238
PRD S G+SL G A+A+CR RE KN
Sbjct: 1297 PRDTSTGRSLGGSADASCRTPRDRSRENGKN 1327
>SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17)
Length = 237
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 452 DDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGD 357
+DS ++ +G +K V K GG+ F H K D
Sbjct: 160 EDSLDQLLGEVKRVLKPGGRFYFIEHIADKSD 191
>SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 468 LQEIIGRFVGENHWSHKARH*EGWEDGLLESHHTERRQGQ 349
L IIG F+G + S KA+ G++DG+ +++ +G+
Sbjct: 185 LDVIIGTFIGPQNASSKAQGFLGYQDGVFQTNFMPDFRGE 224
>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1792
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/63 (25%), Positives = 24/63 (38%)
Frame = -2
Query: 396 EDGLLESHHTERRQGQQLHRRDRPRDRSPGQSLGHAEAACREDFLHPREVTKNSDLLHDA 217
+D LL SHHT+R H DR + H + + + RE N +
Sbjct: 745 KDALLISHHTDRLVAPMQHLGDRREGKRRHHRRHHHSHSQKHRTISEREAIANKARIRSG 804
Query: 216 EIT 208
+T
Sbjct: 805 ALT 807
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 163 NRIGLLTHEFLLDVLSDLS----IVEEVAVFSDFPWMKKILSASCFCVSKALAR 312
NR+ LL++ L +L+D S +VEE + P + +L+A C C K + +
Sbjct: 100 NRLCLLSNRAALAMLNDASPMTFMVEEGLYYLILPLLLTLLTARCLCPFKIVTQ 153
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 384 LESHHTERRQGQQLHRRDR--PRDRSPGQSLGHA 289
LE + R+ + + RRDR R RSP SLG +
Sbjct: 325 LERRRSRARRSRSIERRDRRRSRSRSPRSSLGRS 358
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,067,799
Number of Sequences: 59808
Number of extensions: 350828
Number of successful extensions: 1130
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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