BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0510
(495 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051763-1|AAK93187.1| 805|Drosophila melanogaster LD29208p pro... 39 0.004
AE014298-1561|AAN09285.1| 805|Drosophila melanogaster CG1453-PE... 39 0.004
AE014298-1560|AAN09284.1| 805|Drosophila melanogaster CG1453-PD... 39 0.004
AE014298-1559|AAF48003.2| 805|Drosophila melanogaster CG1453-PC... 39 0.004
AE014298-1558|AAN09283.1| 805|Drosophila melanogaster CG1453-PB... 39 0.004
AE014298-1557|AAN09282.1| 805|Drosophila melanogaster CG1453-PA... 39 0.004
>AY051763-1|AAK93187.1| 805|Drosophila melanogaster LD29208p
protein.
Length = 805
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1
Query: 91 DLAHLRSLNXGDMSAXMYTFHEAIDELQRAEEEXLDNHKAVS 216
DLA L SL+ +MS + H+AID+LQ+ EE ++ H+ V+
Sbjct: 691 DLAMLSSLSEHEMSDELIVQHQAIDDLQQTEEMVVEYHRTVN 732
>AE014298-1561|AAN09285.1| 805|Drosophila melanogaster CG1453-PE,
isoform E protein.
Length = 805
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1
Query: 91 DLAHLRSLNXGDMSAXMYTFHEAIDELQRAEEEXLDNHKAVS 216
DLA L SL+ +MS + H+AID+LQ+ EE ++ H+ V+
Sbjct: 691 DLAMLSSLSEHEMSDELIVQHQAIDDLQQTEEMVVEYHRTVN 732
>AE014298-1560|AAN09284.1| 805|Drosophila melanogaster CG1453-PD,
isoform D protein.
Length = 805
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1
Query: 91 DLAHLRSLNXGDMSAXMYTFHEAIDELQRAEEEXLDNHKAVS 216
DLA L SL+ +MS + H+AID+LQ+ EE ++ H+ V+
Sbjct: 691 DLAMLSSLSEHEMSDELIVQHQAIDDLQQTEEMVVEYHRTVN 732
>AE014298-1559|AAF48003.2| 805|Drosophila melanogaster CG1453-PC,
isoform C protein.
Length = 805
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1
Query: 91 DLAHLRSLNXGDMSAXMYTFHEAIDELQRAEEEXLDNHKAVS 216
DLA L SL+ +MS + H+AID+LQ+ EE ++ H+ V+
Sbjct: 691 DLAMLSSLSEHEMSDELIVQHQAIDDLQQTEEMVVEYHRTVN 732
>AE014298-1558|AAN09283.1| 805|Drosophila melanogaster CG1453-PB,
isoform B protein.
Length = 805
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1
Query: 91 DLAHLRSLNXGDMSAXMYTFHEAIDELQRAEEEXLDNHKAVS 216
DLA L SL+ +MS + H+AID+LQ+ EE ++ H+ V+
Sbjct: 691 DLAMLSSLSEHEMSDELIVQHQAIDDLQQTEEMVVEYHRTVN 732
>AE014298-1557|AAN09282.1| 805|Drosophila melanogaster CG1453-PA,
isoform A protein.
Length = 805
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1
Query: 91 DLAHLRSLNXGDMSAXMYTFHEAIDELQRAEEEXLDNHKAVS 216
DLA L SL+ +MS + H+AID+LQ+ EE ++ H+ V+
Sbjct: 691 DLAMLSSLSEHEMSDELIVQHQAIDDLQQTEEMVVEYHRTVN 732
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,788,657
Number of Sequences: 53049
Number of extensions: 168244
Number of successful extensions: 414
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -