Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0509
(637 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g67110.1 68414.m07635 cytochrome P450, putative similar to Cy... 33 0.16
At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical t... 31 0.48
At5g55400.1 68418.m06902 fimbrin-like protein, putative similar ... 30 1.5
At5g08250.1 68418.m00969 cytochrome P450 family protein contains... 30 1.5
At1g69500.1 68414.m07986 cytochrome P450 family protein similar ... 29 2.0
At4g30780.1 68417.m04361 expressed protein hypothetical protein ... 29 3.4
At5g60210.1 68418.m07547 cytoplasmic linker protein-related cont... 28 4.5
At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related simil... 28 6.0
At3g55020.1 68416.m06110 RabGAP/TBC domain-containing protein lo... 27 7.9
At1g75380.3 68414.m08757 wound-responsive protein-related simila... 27 7.9
At1g75380.2 68414.m08756 wound-responsive protein-related simila... 27 7.9
At1g75380.1 68414.m08755 wound-responsive protein-related simila... 27 7.9
>At1g67110.1 68414.m07635 cytochrome P450, putative similar to
Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
Length = 512
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 3 MIDISKNIVEYLKGHQLEDVDVDDLMRRYTXDVIASAGFGLQVNSLVDKDNEFY 164
M++ +K + E L+ E+V++ + MRR T D+I+ FG S DK E +
Sbjct: 176 MVECTKMMAERLRKEVGEEVEIGEEMRRLTADIISRTEFG----SSCDKGKELF 225
>At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893
Length = 687
Score = 31.5 bits (68), Expect = 0.48
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +2
Query: 155 RILRVWSSNV*HKLATEI*NDIGCTVSNVSQENRIKVFPQKVTRFFREIVTSTMDYRLKN 334
R+L W N H L +GC+V N+ ++ + P V +++ + L N
Sbjct: 187 RVLNPWERNENHTLCLNSAKAVGCSVVNIGTQDLAEGRPHLVLGLISQLIKIQVLADL-N 245
Query: 335 NVERPDMIQLLMDA 376
+ P +++LL D+
Sbjct: 246 LKKTPQLVELLEDS 259
>At5g55400.1 68418.m06902 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 714
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 155 RILRVWSSNV*HKLATEI*NDIGCTVSNVSQENRIKVFPQKVTRFFREIVTSTM--DYRL 328
R+L W N H L +GC+V N+ ++ + P V +++ + D L
Sbjct: 188 RVLNPWERNENHTLCLNSAKAVGCSVVNIGTQDLAEGRPHLVLGLISQLIKIQLLADLSL 247
Query: 329 KNNVERPDMIQLLMD 373
K + P +++L+ D
Sbjct: 248 K---KMPQLVELVED 259
>At5g08250.1 68418.m00969 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 488
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 514 FFLAGFESSANGLTLCIHELALNPEAXEKLYXGVIKFQEEK 636
F LAG ++S+ L+ + NPE EK+ G+ K E++
Sbjct: 268 FILAGRDTSSVALSWFFWLIEKNPEVEEKIMMGICKILEQR 308
>At1g69500.1 68414.m07986 cytochrome P450 family protein similar to
Cytochrome P450 86A2 (SP:O23066) [Arabidopsis
thaliana]contains Pfam profile: PF00067: Cytochrome P450
Length = 478
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 514 FFLAGFESSANGLTLCIHELALNPEAXEKLYXGVIKFQEE 633
F +AG +++A LT I+ + +N EKLY + + ++E
Sbjct: 255 FVIAGRDTTATTLTWAIYMIMMNENVAEKLYSELQELEKE 294
>At4g30780.1 68417.m04361 expressed protein hypothetical protein
F27D4.1 - Arabidopsis thaliana,PID:g4115371
Length = 589
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 431 NLHFFRLIRCSHS*ESLYKHPSVAESYPVFLRCSSIY 321
N HF +L++C H L + P +A P F SI+
Sbjct: 258 NKHFEKLVQCDHRLFHLSRQPEIAIDSPYFDARQSIF 294
>At5g60210.1 68418.m07547 cytoplasmic linker protein-related
contains weak similarity to cytoplasmic linker protein
CLIP-170 (GI:2905649) [Gallus gallus]
Length = 588
Score = 28.3 bits (60), Expect = 4.5
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 16/91 (17%)
Frame = +2
Query: 323 RLKNNVERPDMIQLLMDAYKGTLKNESNESDEKNVGFAMTEEMLK----------PKGNV 472
+L+NN + ++L+ Y+ + ESNE DE+ E L+ +GNV
Sbjct: 312 KLQNNPADLENHEILLKDYESLRRGESNEMDEEVSSLRCEVERLRAALEASDKKDQEGNV 371
Query: 473 ----RKWTQDELTAQ--VSSSSLRDLKARLM 547
R Q EL ++ ++ S + +LKARLM
Sbjct: 372 EASSRLRIQAELQSELKIAKSEIDELKARLM 402
>At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related similar
to U2 small nuclear ribonucleoprotein auxiliary factor
35 kD subunit related protein 1 (sp|Q15695)
Length = 757
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -2
Query: 603 QFFXSFRIQCEFVNAKRQTISRAFKSRKEEDETCAVSS--SWVHFLTFPFG 457
++F ++ CEFVN R ++ + K +TC+ S +++H P G
Sbjct: 358 RYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIHCFRNPGG 408
>At3g55020.1 68416.m06110 RabGAP/TBC domain-containing protein low
similarity to SP|Q9BXI6 EBP50-PDZ interactor of 64 kDa
(EPI64 protein) {Homo sapiens}; contains Pfam profile
PF00566: TBC domain
Length = 777
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -3
Query: 563 MQSVRPLAELSNPARKKMKLVRSVRLGSIFLHSPLVLTSLLS*QNLHFFRL--IRCSH 396
M+ P + A + L++S+ GS F S LVLT+ + QN+H RL +R H
Sbjct: 465 MELYGPALVTTKDAGDAVTLLQSLT-GSTFDSSQLVLTACMGYQNVHEIRLQELRSKH 521
>At1g75380.3 68414.m08757 wound-responsive protein-related similar
to wound inducive gene GI:8096273 from [Nicotiana
tabacum]
Length = 325
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 346 SFYVVLQSIIHSAGHD--LSKETSYFLWKYFYSIFLANVGNCAANIILNLCGQLVLNIA 176
+ Y V++ ++ G++ L + T YF +FL+ VGN + + +L +NIA
Sbjct: 173 TMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIA 231
>At1g75380.2 68414.m08756 wound-responsive protein-related similar
to wound inducive gene GI:8096273 from [Nicotiana
tabacum]
Length = 325
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 346 SFYVVLQSIIHSAGHD--LSKETSYFLWKYFYSIFLANVGNCAANIILNLCGQLVLNIA 176
+ Y V++ ++ G++ L + T YF +FL+ VGN + + +L +NIA
Sbjct: 173 TMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIA 231
>At1g75380.1 68414.m08755 wound-responsive protein-related similar
to wound inducive gene GI:8096273 from [Nicotiana
tabacum]
Length = 325
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -1
Query: 346 SFYVVLQSIIHSAGHD--LSKETSYFLWKYFYSIFLANVGNCAANIILNLCGQLVLNIA 176
+ Y V++ ++ G++ L + T YF +FL+ VGN + + +L +NIA
Sbjct: 173 TMYQVVKEMVDKMGYEVRLVRVTKRVHEAYFAQLFLSKVGNASECVSFDLRPSDAINIA 231
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,328,753
Number of Sequences: 28952
Number of extensions: 233626
Number of successful extensions: 708
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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