Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0501
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   0.77 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   9.5  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 213 EDTYITIR*EQSNNEWDDKXTTEFKADFLSQFDYXTWXNN 332
           + +++T+    S +EWDD  T + KADF     Y  +  N
Sbjct: 401 DSSFVTLPQLHSLDEWDD--TLKEKADFQYYVSYDFYKMN 438


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 458 WRCLYNW 478
           WRCLY W
Sbjct: 161 WRCLYRW 167


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +2

Query: 491 RGSYRNVCKALGGFNTLF 544
           R +Y ++C+ +  FN ++
Sbjct: 223 RKNYNSICELVDAFNNIY 240


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 28  NENSAKKIENVIFVEXTVRVNFENGPSIPFEDCWLRD 138
           ++N AKKI N  +       N +N   I  +  +LRD
Sbjct: 344 SKNVAKKIRNFYYGGPNSENNLDNFYLIHTDTYFLRD 380


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,278
Number of Sequences: 336
Number of extensions: 2052
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)