Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0501
(558 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g32850.6 68417.m04675 nucleotidyltransferase family protein c... 33 0.13
At4g32850.5 68417.m04674 nucleotidyltransferase family protein c... 33 0.13
At4g32850.4 68417.m04671 nucleotidyltransferase family protein c... 33 0.13
At4g32850.3 68417.m04673 nucleotidyltransferase family protein c... 33 0.13
At4g32850.2 68417.m04672 nucleotidyltransferase family protein c... 33 0.13
At4g32850.1 68417.m04676 nucleotidyltransferase family protein c... 33 0.13
At2g25850.2 68415.m03104 nucleotidyltransferase family protein c... 33 0.13
At2g25850.1 68415.m03103 nucleotidyltransferase family protein c... 33 0.13
At1g17980.2 68414.m02224 nucleotidyltransferase family protein c... 31 0.52
At1g17980.1 68414.m02225 nucleotidyltransferase family protein c... 31 0.52
At3g24090.1 68416.m03025 glucosamine--fructose-6-phosphate amino... 30 1.2
At3g62820.1 68416.m07058 invertase/pectin methylesterase inhibit... 28 3.7
>At4g32850.6 68417.m04675 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 745
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = +2
Query: 461 RCLYNWCATKRGSYRNVCKALGGFNTLFLVLR 556
RCL W A KRG Y NV LGG N LV R
Sbjct: 227 RCLKYW-AKKRGVYSNVTGFLGGVNWALLVAR 257
>At4g32850.5 68417.m04674 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 745
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = +2
Query: 461 RCLYNWCATKRGSYRNVCKALGGFNTLFLVLR 556
RCL W A KRG Y NV LGG N LV R
Sbjct: 227 RCLKYW-AKKRGVYSNVTGFLGGVNWALLVAR 257
>At4g32850.4 68417.m04671 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 730
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = +2
Query: 461 RCLYNWCATKRGSYRNVCKALGGFNTLFLVLR 556
RCL W A KRG Y NV LGG N LV R
Sbjct: 227 RCLKYW-AKKRGVYSNVTGFLGGVNWALLVAR 257
>At4g32850.3 68417.m04673 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 735
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = +2
Query: 461 RCLYNWCATKRGSYRNVCKALGGFNTLFLVLR 556
RCL W A KRG Y NV LGG N LV R
Sbjct: 227 RCLKYW-AKKRGVYSNVTGFLGGVNWALLVAR 257
>At4g32850.2 68417.m04672 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 738
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = +2
Query: 461 RCLYNWCATKRGSYRNVCKALGGFNTLFLVLR 556
RCL W A KRG Y NV LGG N LV R
Sbjct: 227 RCLKYW-AKKRGVYSNVTGFLGGVNWALLVAR 257
>At4g32850.1 68417.m04676 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 741
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = +2
Query: 461 RCLYNWCATKRGSYRNVCKALGGFNTLFLVLR 556
RCL W A KRG Y NV LGG N LV R
Sbjct: 227 RCLKYW-AKKRGVYSNVTGFLGGVNWALLVAR 257
>At2g25850.2 68415.m03104 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain; identical to cDNA GI:31747890
Length = 800
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = +2
Query: 461 RCLYNWCATKRGSYRNVCKALGGFNTLFLVLR 556
RCL W A KRG Y NV LGG N LV R
Sbjct: 229 RCLKYW-AKKRGVYSNVTGFLGGVNWALLVAR 259
>At2g25850.1 68415.m03103 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain; identical to cDNA GI:31747890
Length = 787
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = +2
Query: 461 RCLYNWCATKRGSYRNVCKALGGFNTLFLVLR 556
RCL W A KRG Y NV LGG N LV R
Sbjct: 229 RCLKYW-AKKRGVYSNVTGFLGGVNWALLVAR 259
>At1g17980.2 68414.m02224 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 586
Score = 31.1 bits (67), Expect = 0.52
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2
Query: 461 RCLYNWCATKRGSYRNVCKALGGFNTLFLVLR 556
RC+ W A +RG Y NV LGG N LV R
Sbjct: 90 RCMRFW-AKRRGVYSNVSGFLGGINWALLVAR 120
>At1g17980.1 68414.m02225 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 713
Score = 31.1 bits (67), Expect = 0.52
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +2
Query: 461 RCLYNWCATKRGSYRNVCKALGGFNTLFLVLR 556
RC+ W A +RG Y NV LGG N LV R
Sbjct: 217 RCMRFW-AKRRGVYSNVSGFLGGINWALLVAR 247
>At3g24090.1 68416.m03025 glucosamine--fructose-6-phosphate
aminotransferase [isomerizing], putative /
hexosephosphate aminotransferase, putative /
glucosamine-6-phosphate synthase, putative /
D-fructose-6-phosphate amidotransferase, putative /
GLCN6P synthase, putative similar to SP|O94808
Glucosamine--fructose-6-phosphate aminotransferase
[isomerizing] 2 (EC 2.6.1.16) (Hexosephosphate
aminotransferase 2) (D-fructose-6- phosphate
amidotransferase 2) {Homo sapiens}; contains Pfam
profiles PF00310: Glutamine amidotransferases class-II,
PF01380:SIS domain
Length = 691
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -1
Query: 162 IAL*TSAMVSEPTVFK--GNRRAILEVHTYRXLNKDDVFYF 46
IA+ S+ S P VF+ GN +++ T LN D+VFYF
Sbjct: 40 IAIDNSSPSSSPLVFRQAGNIESLVNSITNTDLNLDEVFYF 80
>At3g62820.1 68416.m07058 invertase/pectin methylesterase
inhibitor family protein low similarity to
pectinesterase from Arabidopsis thaliana SP|Q43867,
Lycopersicon esculentum SP|Q43143; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 194
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -2
Query: 83 RTVLSTKMTFSIFFALFSLNPT 18
+T +S+ +TF++ F L SLNPT
Sbjct: 2 KTPMSSSITFALVFFLLSLNPT 23
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,225,184
Number of Sequences: 28952
Number of extensions: 175631
Number of successful extensions: 471
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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