Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0494
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B4E6A Cluster: PREDICTED: similar to conserved ...    41   0.025
UniRef50_UPI0000D56915 Cluster: PREDICTED: similar to CG30185-PA...    40   0.059
UniRef50_Q22VV2 Cluster: Ubiquitin transferase, HECT domain fami...    36   0.55 
UniRef50_Q662K7 Cluster: Antigen, S2, putative; n=7; Borrelia bu...    32   8.9  
UniRef50_Q20220 Cluster: Putative uncharacterized protein; n=2; ...    32   8.9  

>UniRef50_UPI00015B4E6A Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 172

 Score = 40.7 bits (91), Expect = 0.025
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
 Frame = +1

Query: 259 IKMIGKYLDVSVGA--VCYNTDKVPTAVLENKNVEGFVTIILSMV--SKCGTASSEE--Q 420
           ++ I +YLDVS G   V  N     + ++ N++ EGF TI+ ++V  SK      ++   
Sbjct: 9   VQRISEYLDVSPGKLYVSENNTVATSGLVNNQSTEGFSTIVQALVKNSKYPAILGDDAVT 68

Query: 421 RLLTYQWLEYISMFSNQA 474
           + LT QWLEY  +  N A
Sbjct: 69  QALTRQWLEYAVLCVNYA 86


>UniRef50_UPI0000D56915 Cluster: PREDICTED: similar to CG30185-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG30185-PA - Tribolium castaneum
          Length = 132

 Score = 39.5 bits (88), Expect = 0.059
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
 Frame = +1

Query: 259 IKMIGKYLDVSVGAVCYNTDKVPTAVLENKNVEGFVTIILSMVSKCGTAS----SEEQRL 426
           +  I  +L V  G +  + D +P  V+      G++ IIL +V K G AS    S+ ++ 
Sbjct: 9   LNQIATFLKVQPGKITLDDDSMPVRVVNKNTSSGYINIILELV-KEGKASLEGCSDLEKA 67

Query: 427 LTYQWLEY 450
           L  QW+EY
Sbjct: 68  LIRQWIEY 75


>UniRef50_Q22VV2 Cluster: Ubiquitin transferase, HECT domain family
            protein; n=1; Tetrahymena thermophila SB210|Rep:
            Ubiquitin transferase, HECT domain family protein -
            Tetrahymena thermophila SB210
          Length = 4110

 Score = 36.3 bits (80), Expect = 0.55
 Identities = 33/109 (30%), Positives = 52/109 (47%)
 Frame = +1

Query: 256  VIKMIGKYLDVSVGAVCYNTDKVPTAVLENKNVEGFVTIILSMVSKCGTASSEEQRLLTY 435
            +IK + K LD+SV     N +K   A+L NK V+G +TI+  ++ +     S+E  +   
Sbjct: 1614 LIKFLQKILDISVNL---NENK-KIALLNNKTVQGIITILTQLLQRDWKQLSKE--IYDS 1667

Query: 436  QWLEYISMFSNQAVANSTFAFKFLQK*TELYKVTLSDWPFLTIADVAYI 582
            Q L YI    N    +       L+K   LY + L+D    T++  A I
Sbjct: 1668 QILNYILKLKNIGSLDG-----ILEKLCHLYTLALNDEEVETVSIEAQI 1711


>UniRef50_Q662K7 Cluster: Antigen, S2, putative; n=7; Borrelia
           burgdorferi group|Rep: Antigen, S2, putative - Borrelia
           garinii
          Length = 245

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 28/75 (37%), Positives = 37/75 (49%)
 Frame = +1

Query: 319 KVPTAVLENKNVEGFVTIILSMVSKCGTASSEEQRLLTYQWLEYISMFSNQAVANSTFAF 498
           K P  V+EN   EG+VT         G    EE R   +Q L Y +   N  +AN T   
Sbjct: 150 KNPLLVVENSQEEGYVT-----AYPFGILMDEELR-KAFQ-LTYQNGHWNYMLANLTVKN 202

Query: 499 KFLQK*TELYKVTLS 543
           K  QK TE+YK++L+
Sbjct: 203 KITQK-TEIYKISLN 216


>UniRef50_Q20220 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 245

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +1

Query: 217 DYFYAENEYQ*CGVIKMIGKYLDVSVGAVCYNTDKV 324
           D FY E  Y  CG +  +  Y DV VGAVC   D +
Sbjct: 123 DKFYVEARY--CGELGRLAYYNDVVVGAVCCRIDDI 156


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,860,310
Number of Sequences: 1657284
Number of extensions: 10565820
Number of successful extensions: 17824
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17819
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)