Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0492
(578 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g13700.1 68418.m01595 polyamine oxidase, putative similar to ... 58 6e-09
At3g59050.1 68416.m06582 amine oxidase family protein similar to... 50 1e-06
At2g43020.1 68415.m05339 amine oxidase family protein similar to... 45 4e-05
At1g65840.1 68414.m07470 amine oxidase family protein similar to... 45 4e-05
At4g29720.1 68417.m04232 amine oxidase family protein similar to... 44 7e-05
At3g13682.1 68416.m01728 amine oxidase family protein / SWIRM do... 43 2e-04
At1g62830.1 68414.m07093 amine oxidase family protein / SWIRM do... 37 0.011
At3g10390.1 68416.m01245 amine oxidase family protein / SWIRM do... 35 0.045
At3g09580.1 68416.m01138 amine oxidase family protein low simila... 32 0.32
At1g80440.1 68414.m09419 kelch repeat-containing F-box family pr... 30 1.3
At3g59430.2 68416.m06629 expressed protein 29 3.0
At3g59430.1 68416.m06628 expressed protein 29 3.0
At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putat... 29 3.0
At4g13020.2 68417.m02032 serine/threonine protein kinase (MHK) i... 28 3.9
At4g13020.1 68417.m02031 serine/threonine protein kinase (MHK) i... 28 3.9
At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putat... 28 5.2
At1g75640.1 68414.m08788 leucine-rich repeat family protein / pr... 27 6.8
At5g54770.1 68418.m06822 thiazole biosynthetic enzyme, chloropla... 27 9.0
At3g46920.1 68416.m05092 protein kinase family protein similar t... 27 9.0
At1g57770.1 68414.m06554 amine oxidase family contains similarit... 27 9.0
>At5g13700.1 68418.m01595 polyamine oxidase, putative similar to
SP|O64411 Polyamine oxidase precursor (EC 1.5.3.11) from
Zea mays
Length = 472
Score = 57.6 bits (133), Expect = 6e-09
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Frame = +1
Query: 253 GMAGLSAAHRLTQCGIRNFVVLEANERPGGRIHSCWLGDAVIEMGAEWIS--GACLPNSV 426
G++G+SAA L + G+ + ++LEA +R GGRIH GD +E+GA WI+ G N V
Sbjct: 12 GISGISAAKVLVENGVEDVLILEATDRIGGRIHKQNFGDVPVELGAGWIAGVGGKESNPV 71
Query: 427 YTLASQDRL 453
+ LAS+ L
Sbjct: 72 WELASRFNL 80
>At3g59050.1 68416.m06582 amine oxidase family protein similar to
polyamine oxidase (EC 1.5.3.11) precursor - Zea mays
[SP|O64411]; contains Pfam profile PF01593 amine
oxidase, flavin-containing
Length = 488
Score = 49.6 bits (113), Expect = 1e-06
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +1
Query: 253 GMAGLSAAHRLTQCGIRNFVVLEANERPGGRIHSCWLGDAVIEMGAEWISGACLPN 420
GMAG+SAA L + VVLE+ +R GGR+H+ + +++GA W+ G C N
Sbjct: 37 GMAGISAARTLQDASFQ-VVVLESRDRIGGRVHTDYSFGFPVDLGASWLHGVCKEN 91
>At2g43020.1 68415.m05339 amine oxidase family protein similar to
polyamine oxidase SP:O64411 [Zea mays]; contains Pfam
profile PF01593 amine oxidase, flavin-containing
Length = 490
Score = 44.8 bits (101), Expect = 4e-05
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +1
Query: 253 GMAGLSAAHRLTQCGIRNFVVLEANERPGGRIHSCWLGDAVIEMGAEWISGACLPN 420
G G+SAA L + +VLE+ +R GGR+H+ + +++GA W+ G C N
Sbjct: 36 GFGGISAARTLQDASFQ-VMVLESRDRIGGRVHTDYSFGFPVDLGASWLHGVCKEN 90
>At1g65840.1 68414.m07470 amine oxidase family protein similar to
polyamine oxidase SP:O64411 [Zea mays]; contains Pfam
profile PF01593 amine oxidase, flavin-containing
Length = 497
Score = 44.8 bits (101), Expect = 4e-05
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 253 GMAGLSAAHRLTQCGIRNFVVLEANERPGGRIHSCWLGDAVIEMGAEWISG 405
G++GL+AA L++ + VLE+ +R GGRIH+ + ++MGA W+ G
Sbjct: 37 GISGLAAARNLSEASFK-VTVLESRDRIGGRIHTDYSFGCPVDMGASWLHG 86
>At4g29720.1 68417.m04232 amine oxidase family protein similar to
polyamine oxidase isoform-2 [Homo sapiens] GI:16554963;
contains Pfam profile PF01593: amine oxidase,
flavin-containing
Length = 533
Score = 44.0 bits (99), Expect = 7e-05
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +1
Query: 253 GMAGLSAAHRLTQCGIRNFV--VLEANERPGGRIHSCWLGDAVIEMGAEWISGACLPNSV 426
GMAGL+AA++L F V+E R GGRI++ IEMGA WI G + V
Sbjct: 13 GMAGLTAANKLYTSSNNTFELSVVEGGSRIGGRINTSEFSSEKIEMGATWIHGIG-GSPV 71
Query: 427 YTLASQDRLL--QTPLQRLDSS 486
Y +A + L P + +DS+
Sbjct: 72 YRIAKETGSLVSDEPWECMDST 93
>At3g13682.1 68416.m01728 amine oxidase family protein / SWIRM
domain-containing protein similar to polyamine oxidase
isoform-1 [Homo sapiens] GI:14860862; contains Pfam
profile:PF01593 Flavin containing amine oxidase
Length = 746
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = +1
Query: 253 GMAGLSAAHRLTQCGIRNFVVLEANERPGGRIHSCWLGD----AVIEMGAEWISGACLPN 420
G+AGL+AA +L G + +VLE RPGGR+++ +G A +E+G I+G N
Sbjct: 168 GLAGLAAARQLLSFGFK-VLVLEGRSRPGGRVYTQKMGGKDRFAAVELGGSVITG-LHAN 225
Query: 421 SVYTLASQDRLLQTPLQRLDSSRGLFCTSG 510
+ LA Q L PL ++ + L+ + G
Sbjct: 226 PLGVLARQ---LSIPLHKVRDNCPLYNSEG 252
>At1g62830.1 68414.m07093 amine oxidase family protein / SWIRM
domain-containing protein contains Pfam profile: PF01593
Flavin containing amine oxidase
Length = 844
Score = 36.7 bits (81), Expect = 0.011
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 253 GMAGLSAAHRLTQCGIRNFVVLEANERPGGRIHSCWL--GDAVIEMGAEWISGACLPN-S 423
G+AGL AA +L G R +VLE +RPGGR+ + + GD V M + G+ L +
Sbjct: 274 GLAGLVAARQLLSMGFR-VLVLEGRDRPGGRVKTRKMKGGDGVEAMAD--VGGSVLTGIN 330
Query: 424 VYTLASQDRLLQTPLQRLDSSRGLFCTSGDV 516
L R L PL ++ L+ +G++
Sbjct: 331 GNPLGVLARQLGLPLHKVRDICPLYLPNGEL 361
>At3g10390.1 68416.m01245 amine oxidase family protein / SWIRM
domain-containing protein contains Pfam profile: PF01593
Flavin containing amine oxidase
Length = 789
Score = 34.7 bits (76), Expect = 0.045
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +1
Query: 253 GMAGLSAAHRLTQCGIRNFVVLEANERPGGRIHS 354
G++GL+AA +L + G + VLE +RPGGR+++
Sbjct: 193 GLSGLAAARQLMRFGFK-VTVLEGRKRPGGRVYT 225
>At3g09580.1 68416.m01138 amine oxidase family protein low
similarity to SP|P28553 Phytoene dehydrogenase,
chloroplast precursor (Phytoene desaturase) from Glycine
max; contains Pfam profile PF01593 amine oxidase,
flavin-containing
Length = 477
Score = 31.9 bits (69), Expect = 0.32
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 253 GMAGLSAAHRLTQCGIRNFVVLEANERPGGRIHS 354
G+AGL+AA++LT I F++LEA++ GGR+ +
Sbjct: 55 GLAGLAAANQLTSKRIP-FLLLEASDGVGGRVRT 87
>At1g80440.1 68414.m09419 kelch repeat-containing F-box family
protein similar to SP|Q9ER30 Kelch-related protein 1
(Sarcosin) {Rattus norvegicus}; contains Pfam profiles
PF01344: Kelch motif, PF00646: F-box domain
Length = 354
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 337 GGRIHSCWLGDAVIEMGAEWISGACLPNSVYTL 435
GG +++CW GD ++ + +W +P VY +
Sbjct: 266 GGDLYACWGGDVMMFLNDKWQKVGQIPADVYNV 298
>At3g59430.2 68416.m06629 expressed protein
Length = 451
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -1
Query: 398 IHSAPISITASPSQHECILPPGRSFASKTTKLRIP--H*VNRCAAESPAIPHLQLSPLVP 225
+ S S +P +CI+PPG+ AS++ + H E P P ++ +V
Sbjct: 304 VESYSKSCCVNPVDLDCIIPPGKKLASESDMVAAEQNHSAGDLLVEIPKNPSMESFQIVG 363
Query: 224 DKSD*YC 204
+ S C
Sbjct: 364 NSSTVIC 370
>At3g59430.1 68416.m06628 expressed protein
Length = 451
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -1
Query: 398 IHSAPISITASPSQHECILPPGRSFASKTTKLRIP--H*VNRCAAESPAIPHLQLSPLVP 225
+ S S +P +CI+PPG+ AS++ + H E P P ++ +V
Sbjct: 304 VESYSKSCCVNPVDLDCIIPPGKKLASESDMVAAEQNHSAGDLLVEIPKNPSMESFQIVG 363
Query: 224 DKSD*YC 204
+ S C
Sbjct: 364 NSSTVIC 370
>At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profile PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase
Length = 867
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +1
Query: 253 GMAGLSAAHRLTQCGIRNFVVLEANERPGGRIHSCWLGDAVIEMGAEWISGACLPNSV 426
G++GL +A+ L G++ V+ E E GG + +++G + PN +
Sbjct: 9 GISGLGSAYVLANQGVKEVVLYEKEESLGGHAKTVRFDGVDLDLGFMVFNRVTYPNMI 66
>At4g13020.2 68417.m02032 serine/threonine protein kinase (MHK)
identical to serine/threonine-protein kinase MHK
[Arabidopsis thaliana] SWISS-PROT:P43294
Length = 443
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 422 EFGKQAPDIHSAPISITASPSQHECILPPGRSFASKTTKLR 300
E G AP + S+P+S++ SP Q + PP S + T+ ++
Sbjct: 383 ENGLHAP-VESSPLSLSFSPMQQHTVGPPQSSGFTMTSSMQ 422
>At4g13020.1 68417.m02031 serine/threonine protein kinase (MHK)
identical to serine/threonine-protein kinase MHK
[Arabidopsis thaliana] SWISS-PROT:P43294
Length = 435
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 422 EFGKQAPDIHSAPISITASPSQHECILPPGRSFASKTTKLR 300
E G AP + S+P+S++ SP Q + PP S + T+ ++
Sbjct: 375 ENGLHAP-VESSPLSLSFSPMQQHTVGPPQSSGFTMTSSMQ 414
>At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profiles PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase, PF01593: amine oxidase, flavin-containing
Length = 867
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +1
Query: 253 GMAGLSAAHRLTQCGIRNFVVLEANERPGGRIHSCWLGDAVIEMGAEWISGACLPN 420
G++GL +A+ L G++ V+ E E GG + +++G + PN
Sbjct: 9 GISGLGSAYVLANQGVKEVVLYEKEESLGGHAKTVRFDGVDLDLGFMVFNRVTYPN 64
>At1g75640.1 68414.m08788 leucine-rich repeat family protein /
protein kinase family protein contains protein kinase
domain, Pfam:PF00069; contains leucine-rich repeats,
Pfam:PF00560
Length = 1140
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 211 QSDLSGTKGDNCRCGMAGLSAAHRLTQCGIRNF 309
++ +GT + CG +G +++ R+ Q G+ NF
Sbjct: 268 ENSFTGTVPVSLLCGYSGYNSSMRIIQLGVNNF 300
>At5g54770.1 68418.m06822 thiazole biosynthetic enzyme, chloroplast
(ARA6) (THI1) (THI4) identical to SP|Q38814 Thiazole
biosynthetic enzyme, chloroplast precursor (ARA6)
{Arabidopsis thaliana}
Length = 349
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 253 GMAGLSAAHRLTQCGIRNFVVLEANERPGGRIHSCWLG 366
G AGLSAA+ +++ ++E + PGG WLG
Sbjct: 92 GSAGLSAAYEISKNPNVQVAIIEQSVSPGG---GAWLG 126
>At3g46920.1 68416.m05092 protein kinase family protein similar to
MAP3K delta-1 protein kinase [Arabidopsis thaliana]
GI:2253010; contains Pfam profile: PF00069 Eukaryotic
protein kinase domain
Length = 1171
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -1
Query: 365 PSQHECILPPGRSFASKTTKLRIPH*VNRCAAESPAIPHLQLSPLVPDKSD 213
PS H +LP G SF + T VN C + PH+ P++ + +D
Sbjct: 440 PSNH-VVLPDG-SFYQQVTMAESFQRVNDCHMCQTSFPHMHSDPIMREGND 488
>At1g57770.1 68414.m06554 amine oxidase family contains similarity
to carotenoid isomerase [Lycopersicon esculentum]
GI:19550437, phytoene dehydrogenase (PDH1) GI:433144
from (Cercospora nicotianae); contains Pfam profile
PF01593 amine oxidase, flavin-containing
Length = 574
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 253 GMAGLSAAHRLTQCGIRNFVVLEANERPGGRIHSCWLGDAVIEMGAEWISG 405
G+ GL L + ++ +VLE+++ PGG HS + + G SG
Sbjct: 61 GIGGLCCGALLARYD-QDVIVLESHDHPGGAAHSFEIKGYKFDSGPSLFSG 110
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,154,516
Number of Sequences: 28952
Number of extensions: 283244
Number of successful extensions: 712
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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