Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0487
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   1.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.9  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.6  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
 Frame = +2

Query: 47  LQIYSQ*CFKSVLHRTKDVIIYFAVYDYCITSTNM*NSWF---TNLL------QYFW*SE 199
           ++  SQ   ++ L   +D+ +YF+V    +    M  SW+   TNL       +Y+W + 
Sbjct: 1   MEYRSQTLMQTTLRLIRDLSLYFSVIYSLLRVKRMMRSWYYLLTNLTYNNTNRKYYWLNV 60

Query: 200 C 202
           C
Sbjct: 61  C 61


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 522 SRSPARVLERAHLPFDXHRRLVAGAVXAISLPL 620
           SR P+ V++ +H+P D      AGA+    L L
Sbjct: 416 SRKPSFVIQFSHIPVDNIE--FAGALVTYELTL 446


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 104 IIYFAVYDYCITSTNM*NSWFTNLLQYF 187
           II+FA Y Y   + ++   + T +L YF
Sbjct: 162 IIFFASYQYGTKTYSLFIVFMTVILPYF 189


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 104 IIYFAVYDYCITSTNM*NSWFTNLLQYF 187
           II+FA Y Y   + ++   + T +L YF
Sbjct: 162 IIFFASYQYGTKTYSLFIVFMTVILPYF 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,567
Number of Sequences: 336
Number of extensions: 3250
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)