Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0487
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 78 5e-15
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 55 4e-08
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 45 5e-05
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 45 5e-05
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 44 7e-05
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 44 7e-05
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 42 4e-04
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 38 0.006
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 38 0.006
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 38 0.006
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 38 0.006
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 35 0.043
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 34 0.075
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 34 0.099
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 33 0.17
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 30 1.2
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 30 1.2
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 29 2.1
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 29 3.7
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 78.2 bits (184), Expect = 5e-15
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +1
Query: 475 QIPL*FP*SNVLGNNIPVHPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
Q P P +G IP HPH+YSNGHICLS L+DDW+PALSVQSVCLSI
Sbjct: 64 QYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSVCLSI 113
Score = 72.9 bits (171), Expect = 2e-13
Identities = 34/66 (51%), Positives = 41/66 (62%)
Frame = +2
Query: 305 RRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 484
RRL KEL L E P G+ VD S +L W + + G GTLY GE F+LQF F +YP
Sbjct: 7 RRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYP 66
Query: 485 FDSPEV 502
F+SPEV
Sbjct: 67 FNSPEV 72
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = +2
Query: 287 TSVNSQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFK 466
TS + R L EL +L +P G T+D ++ NL +WTV + G P TLY+G F +
Sbjct: 7 TSSGALRALTMELKNLQSQPVEGFTIDVNE--DNLFVWTVGIYGPPKTLYQGGYFKASIR 64
Query: 467 FTNKYPFDSPEV 502
F + YP+ P +
Sbjct: 65 FPSNYPYSPPSM 76
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 13/45 (28%)
Frame = +1
Query: 529 HPHVYSNGHICLSXL---TDD----------WSPALSVQSVCLSI 624
HP+VY NG +C+S L DD W+P SV+++ LS+
Sbjct: 84 HPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRTILLSV 128
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
S+RRL ++ L ++PP GV+ G N+ W + G T +E F L +FT +
Sbjct: 5 SRRRLMRDFKKLQEDPPAGVS--GAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEE 62
Query: 479 YPFDSPEV 502
YP P V
Sbjct: 63 YPNKPPTV 70
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSIR 627
HP+VY++G ICL L + WSP V ++ SI+
Sbjct: 78 HPNVYADGSICLDILQNRWSPTYDVAAILTSIQ 110
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
S+RRL ++ L ++PP GV+ G N+ W + G T +E F L +FT +
Sbjct: 5 SRRRLMRDFKKLQEDPPAGVS--GAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEE 62
Query: 479 YPFDSPEV 502
YP P V
Sbjct: 63 YPNKPPTV 70
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSIR 627
HP+VY++G ICL L + WSP V ++ SI+
Sbjct: 78 HPNVYADGSICLDILQNRWSPTYDVAAILTSIQ 110
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ SNG ICL L WSPAL++ V LSI
Sbjct: 75 HPNINSNGSICLDILRSQWSPALTISKVLLSI 106
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +2
Query: 305 RRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 484
+R+QKEL L ++PP +L W + G P + Y+G F L F YP
Sbjct: 4 KRIQKELQDLGRDPP--AQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61
Query: 485 FDSPEV 502
F P+V
Sbjct: 62 FKPPKV 67
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ SNG ICL L WSPAL++ V LSI
Sbjct: 75 HPNINSNGSICLDILRSQWSPALTISKVLLSI 106
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +2
Query: 305 RRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 484
+R+QKEL L ++PP +L W + G P + Y+G F L F YP
Sbjct: 4 KRIQKELQDLGRDPP--AQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61
Query: 485 FDSPEV 502
F P+V
Sbjct: 62 FKPPKV 67
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSIR 627
HP++ G ICL L D WSPAL +++V LSI+
Sbjct: 78 HPNIDKLGRICLDILKDKWSPALQIRTVLLSIQ 110
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +2
Query: 305 RRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 484
RR+ KE L+ +P PG++ + D++ N + V + G + + G F L+ +YP
Sbjct: 7 RRIIKETQRLLADPVPGISANPDES--NARYFHVMIAGPDDSPFAGGVFKLELFLPEEYP 64
Query: 485 FDSPEV 502
+P+V
Sbjct: 65 MAAPKV 70
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/35 (40%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTD--DWSPALSVQSVCLSIR 627
HP+VY +G +CLS L + DW P++S++ + + I+
Sbjct: 83 HPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQ 117
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/35 (40%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTD--DWSPALSVQSVCLSIR 627
HP+VY +G +CLS L + DW P++S++ + + I+
Sbjct: 83 HPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQ 117
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +2
Query: 296 NSQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTN 475
N +R KE+++ + G+ ++ ++NLT H+ G P T Y G F L K +
Sbjct: 7 NRLQRECKEVVTNSEISETGIMIE--ILNENLTEIKGHIRGPPDTPYAGGMFDLDIKIPD 64
Query: 476 KYPFDSPEV 502
+YPF P V
Sbjct: 65 QYPFSPPNV 73
Score = 34.3 bits (75), Expect = 0.075
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 529 HPHVYSN-GHICLSXLTDDWSPALSVQSVCLSIR 627
HP+V S G ICL L D W+ +L++++V LSI+
Sbjct: 81 HPNVSSQTGVICLDILKDQWAASLTLRTVLLSIQ 114
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +2
Query: 305 RRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 484
+RL+K+ L+KEP P + N+ W + G P T YEG ++ + F +P
Sbjct: 11 QRLKKDYQRLLKEPVP--FMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFP 68
Query: 485 FDSPEV 502
F P +
Sbjct: 69 FKPPAI 74
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 35.1 bits (77), Expect = 0.043
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +2
Query: 290 SVNSQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKF 469
S ++ RRLQK+ LM++P G+ ++ N+ W + G P T + G + + F
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALPNE--DNILEWHYCLRGSPDTPFYGGYYWGKVIF 74
Query: 470 TNKYPFDSPEV 502
+P+ P +
Sbjct: 75 KENFPWSPPAI 85
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 34.3 bits (75), Expect = 0.075
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 371 DQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPEV 502
D + LT WT + G P T YE + LQ + YP + P V
Sbjct: 32 DDSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTV 75
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 33.9 bits (74), Expect = 0.099
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2
Query: 311 LQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFD 490
L+K+L + + P G + G ++ W V + G P TLYEG F F YP
Sbjct: 8 LKKQLADMRRVPVDGFSA-GLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQK 66
Query: 491 SPEV 502
P++
Sbjct: 67 PPKM 70
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 529 HPHVYSN-GHICLSXLTDDWSPALSVQSVCLSIR 627
HP++ S G ICL L D W+ +L++++V LS++
Sbjct: 110 HPNISSQTGTICLDILKDKWTASLTLRTVLLSLQ 143
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 410 MEGVPGTLYEGEKFVLQFKFTNKYPFDSPEV 502
++G GT Y G F ++ YPF+ P+V
Sbjct: 57 IKGPEGTPYAGGTFEIKVDIPEHYPFEPPKV 87
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 410 MEGVPGTLYEGEKFVLQFKFTNKYPFDSPEV 502
++GV T YEG F L K YPF +P V
Sbjct: 385 IKGVEETPYEGGIFELDIKIGESYPFKAPTV 415
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/74 (29%), Positives = 28/74 (37%)
Frame = +2
Query: 281 YYTSVNSQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQ 460
Y T RRL KE M L + P NL W + G GT +EG + +
Sbjct: 5 YNTKNAGVRRLMKEAMELRQ---PTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGR 61
Query: 461 FKFTNKYPFDSPEV 502
F YP P +
Sbjct: 62 IIFPADYPMKPPNL 75
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 13/45 (28%)
Frame = +1
Query: 529 HPHVYSNGHICLSXL---TDD----------WSPALSVQSVCLSI 624
HP++Y++G +C+S L DD WSP S++ + LS+
Sbjct: 79 HPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSV 123
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 305 RRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVL 457
+R+QKEL L ++PP + +L W + G P + Y+G F L
Sbjct: 4 KRIQKELHDLGRDPPAQCST--GSVGDDLYHWQATIMGPPESPYQGGIFFL 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,277,332
Number of Sequences: 27780
Number of extensions: 302764
Number of successful extensions: 615
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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