Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0487
(642 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 64 8e-11
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 64 1e-10
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 63 2e-10
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 62 2e-10
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 52 3e-07
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 50 2e-06
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 48 7e-06
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 46 2e-05
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 46 3e-05
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 46 3e-05
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 46 3e-05
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 45 4e-05
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 45 4e-05
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 45 4e-05
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 45 4e-05
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 45 4e-05
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 45 4e-05
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 45 4e-05
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 45 4e-05
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 45 5e-05
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 44 1e-04
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 44 1e-04
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 44 1e-04
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 44 1e-04
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 42 3e-04
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 42 3e-04
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 42 3e-04
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 42 3e-04
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 42 5e-04
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 41 6e-04
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 41 8e-04
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 40 0.002
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 40 0.002
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 39 0.002
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 39 0.003
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 38 0.006
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 38 0.006
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 38 0.007
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 36 0.023
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 35 0.040
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 32 0.28
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 29 2.0
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 29 2.0
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 29 3.5
At1g59660.1 68414.m06710 nucleoporin family protein contains Pfa... 29 3.5
At1g03380.1 68414.m00317 expressed protein 28 6.1
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 64.1 bits (149), Expect = 8e-11
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +1
Query: 523 PVHPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
P+HPH+YSNGHICL L D WSPA++V SVC+SI
Sbjct: 87 PLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/65 (40%), Positives = 35/65 (53%)
Frame = +2
Query: 308 RLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPF 487
RLQKEL PP G + + NL W + + G PGTLY E + LQ +F YP
Sbjct: 19 RLQKELSEWQVNPPTGFK---HRVTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPM 75
Query: 488 DSPEV 502
++P+V
Sbjct: 76 EAPQV 80
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 63.7 bits (148), Expect = 1e-10
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1
Query: 523 PVHPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
P+HPH+YSNGHICL L D WSPA++V S+C+SI
Sbjct: 87 PLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
Score = 55.2 bits (127), Expect = 3e-08
Identities = 26/65 (40%), Positives = 35/65 (53%)
Frame = +2
Query: 308 RLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPF 487
RLQKEL+ PP G + + NL W + + G PGTLY + + LQ F YP
Sbjct: 19 RLQKELVEWQMNPPTGFK---HKVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPM 75
Query: 488 DSPEV 502
+SP+V
Sbjct: 76 ESPQV 80
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 62.9 bits (146), Expect = 2e-10
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +1
Query: 523 PVHPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
P HPH+YSNGHICL L D WSPA++V SVC+SI
Sbjct: 87 PSHPHIYSNGHICLDILYDSWSPAMTVNSVCISI 120
Score = 57.6 bits (133), Expect = 7e-09
Identities = 27/65 (41%), Positives = 36/65 (55%)
Frame = +2
Query: 308 RLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPF 487
RLQKEL PP G + + NL WT+ + G PGTLY E + LQ +F YP
Sbjct: 19 RLQKELSEWQLNPPTGFR---HKVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPM 75
Query: 488 DSPEV 502
++P+V
Sbjct: 76 EAPQV 80
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 62.5 bits (145), Expect = 2e-10
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +1
Query: 523 PVHPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
P+HPH+YSNGHICL L D WSPA+ + S+CLSI
Sbjct: 87 PLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSI 120
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/65 (43%), Positives = 36/65 (55%)
Frame = +2
Query: 308 RLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPF 487
RLQKE M PP G + S NL W + + GVPGTLY E + LQ +F YP
Sbjct: 19 RLQKEFMEWQTNPPSGFK---HRVSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPM 75
Query: 488 DSPEV 502
++P+V
Sbjct: 76 EAPQV 80
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +2
Query: 305 RRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 484
+RLQ ELM LM PG++ ++ N+ W + G T++EG ++ L F+N YP
Sbjct: 39 KRLQSELMGLMMGADPGISAFPEE--DNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYP 96
Query: 485 FDSPEV 502
F SP+V
Sbjct: 97 FKSPKV 102
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSIR 627
HP+V G+ICL L D WS A V+++ LSI+
Sbjct: 110 HPNVDLYGNICLDILQDKWSSAYDVRTILLSIQ 142
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +2
Query: 305 RRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 484
+RLQ ELM LM PG++ ++ N+ W + G T++EG ++ L F+N YP
Sbjct: 38 KRLQSELMGLMMGGGPGISAFPEE--DNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYP 95
Query: 485 FDSPEV 502
F P+V
Sbjct: 96 FKPPKV 101
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSIR 627
HP+V G+ICL L D WS A V+++ LSI+
Sbjct: 109 HPNVDVYGNICLDILQDKWSSAYDVRTILLSIQ 141
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 47.6 bits (108), Expect = 7e-06
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ SNG+ICL L D WSPAL++ V LSI
Sbjct: 75 HPNINSNGNICLDILKDQWSPALTISKVLLSI 106
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +2
Query: 305 RRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 484
RR+ KEL L ++PP V+ +++ W + G + Y G F++ F YP
Sbjct: 4 RRILKELKELQRDPP--VSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYP 61
Query: 485 FDSPEV 502
F P+V
Sbjct: 62 FKPPKV 67
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 287 TSVN-SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQF 463
TSV+ S +R+Q+E+ L +PPP + NL W + G GT YEG F L
Sbjct: 32 TSVSASGKRIQREMAELNIDPPPDCSAG--PKGDNLYHWIATIIGPSGTPYEGGIFFLDI 89
Query: 464 KFTNKYPFDSPEV 502
F + YPF P++
Sbjct: 90 IFPSDYPFKPPKL 102
Score = 30.7 bits (66), Expect = 0.86
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSIR 627
H +V + G + ++ L D WSPAL++ V +IR
Sbjct: 110 HCNVDTAGDLSVNILRDSWSPALTITKVLQAIR 142
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ SNG ICL L + WSPAL+V V LSI
Sbjct: 75 HPNINSNGSICLDILKEQWSPALTVSKVLLSI 106
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
+ +R+ KEL L ++PP V+ ++ W + G + + G F++ F
Sbjct: 2 ASKRINKELRDLQRDPP--VSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPD 59
Query: 479 YPFDSPEV 502
YPF P+V
Sbjct: 60 YPFKPPKV 67
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ SNG ICL L + WSPAL+V V LSI
Sbjct: 75 HPNINSNGSICLDILKEQWSPALTVSKVLLSI 106
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
+ +R+ KEL L ++PP V+ ++ W + G + + G F++ F
Sbjct: 2 ASKRINKELRDLQRDPP--VSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPD 59
Query: 479 YPFDSPEV 502
YPF P+V
Sbjct: 60 YPFKPPKV 67
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP+V SNG ICL L + WSPAL++ V LSI
Sbjct: 75 HPNVNSNGSICLDILKEQWSPALTISKVLLSI 106
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
+ +R+ KEL L K+PP + ++++ W + G + Y G F++ F
Sbjct: 2 ASKRILKELKDLQKDPP--TSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPD 59
Query: 479 YPFDSPEV 502
YPF P+V
Sbjct: 60 YPFKPPKV 67
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ SNG ICL L + WSPAL++ V LSI
Sbjct: 75 HPNINSNGSICLDILKEQWSPALTISKVLLSI 106
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
+ +R+ KEL L K+PP + ++++ W + G + Y G F++ F
Sbjct: 2 ASKRILKELKDLQKDPP--TSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPD 59
Query: 479 YPFDSPEV 502
YPF P+V
Sbjct: 60 YPFKPPKV 67
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ SNG ICL L + WSPAL++ V LSI
Sbjct: 75 HPNINSNGSICLDILKEQWSPALTISKVLLSI 106
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
+ +R+ KEL L K+PP + ++++ W + G + Y G F++ F
Sbjct: 2 ASKRILKELKDLQKDPP--TSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPD 59
Query: 479 YPFDSPEV 502
YPF P+V
Sbjct: 60 YPFKPPKV 67
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ SNG ICL L + WSPAL++ V LSI
Sbjct: 76 HPNINSNGSICLDILKEQWSPALTISKVLLSI 107
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
+ +R+ KEL L K+PP G A +++ W + G + Y G F++ F
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVA-EDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60
Query: 479 YPFDSPEV 502
YPF P+V
Sbjct: 61 YPFKPPKV 68
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ SNG ICL L + WSPAL++ V LSI
Sbjct: 75 HPNINSNGSICLDILKEQWSPALTISKVLLSI 106
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
+ +R+ KEL L K+PP + ++++ W + G + Y G F++ F
Sbjct: 2 ASKRILKELKDLQKDPP--TSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 59
Query: 479 YPFDSPEV 502
YPF P+V
Sbjct: 60 YPFKPPKV 67
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ SNG ICL L + WSPAL++ V LSI
Sbjct: 75 HPNINSNGSICLDILKEQWSPALTISKVLLSI 106
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
+ +R+ KEL L K+PP + ++++ W + G + Y G F++ F
Sbjct: 2 ASKRILKELKDLQKDPP--TSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 59
Query: 479 YPFDSPEV 502
YPF P+V
Sbjct: 60 YPFKPPKV 67
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ SNG ICL L + WSPAL++ V LSI
Sbjct: 105 HPNINSNGSICLDILKEQWSPALTISKVLLSI 136
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
+ +R+ KEL L K+PP + ++++ W + G + Y G F++ F
Sbjct: 32 ASKRILKELKDLQKDPP--TSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPD 89
Query: 479 YPFDSPEV 502
YPF P+V
Sbjct: 90 YPFKPPKV 97
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ SNG ICL L + WSPAL++ V LSI
Sbjct: 75 HPNINSNGSICLDILKEQWSPALTISKVLLSI 106
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
+ +R+ KEL L K+PP + ++++ W + G + Y G F++ F
Sbjct: 2 ASKRILKELKDLQKDPP--TSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPD 59
Query: 479 YPFDSPEV 502
YPF P+V
Sbjct: 60 YPFKPPKV 67
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ SNG ICL L + WSPAL++ V LSI
Sbjct: 75 HPNINSNGSICLDILKEQWSPALTISKVLLSI 106
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
+ +R+ KEL L K+PP + ++++ W + G P + Y G F++ F
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAG--PVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPD 59
Query: 479 YPFDSPEV 502
YPF P+V
Sbjct: 60 YPFKPPKV 67
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/64 (39%), Positives = 32/64 (50%)
Frame = +2
Query: 311 LQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFD 490
LQK+L L K+P G + G +N+ W+V + G P TLYEG F F YP
Sbjct: 10 LQKQLKDLCKKPVDGFSA-GLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVS 68
Query: 491 SPEV 502
P V
Sbjct: 69 PPTV 72
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 13/45 (28%)
Frame = +1
Query: 529 HPHVYSNGHICLSXL-------------TDDWSPALSVQSVCLSI 624
HP+VYS+G +C+S L ++ W+P +V+S+ LSI
Sbjct: 80 HPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSI 124
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/64 (39%), Positives = 31/64 (48%)
Frame = +2
Query: 311 LQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFD 490
LQK+L L K P G + G +N+ W+V + G P TLYEG F F YP
Sbjct: 9 LQKQLKDLCKHPVDGFSA-GLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNS 67
Query: 491 SPEV 502
P V
Sbjct: 68 PPTV 71
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 13/45 (28%)
Frame = +1
Query: 529 HPHVYSNGHICLSXL-------------TDDWSPALSVQSVCLSI 624
HP+VY +G +C+S L ++ W+P +V+S+ LSI
Sbjct: 79 HPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSI 123
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +2
Query: 290 SVNSQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKF 469
S +++RL ++ L ++PP G++ G N+ LW + G T ++G F L +F
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGIS--GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 470 TNKYPFDSPEV 502
+ YP P V
Sbjct: 60 SEDYPNKPPTV 70
Score = 39.1 bits (87), Expect = 0.002
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSIR 627
HP++Y++G ICL L + WSP V ++ SI+
Sbjct: 78 HPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 110
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +2
Query: 290 SVNSQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKF 469
S +++RL ++ L ++PP G++ G N+ LW + G T ++G F L +F
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGIS--GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 470 TNKYPFDSPEV 502
+ YP P V
Sbjct: 60 SEDYPNKPPTV 70
Score = 39.1 bits (87), Expect = 0.002
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSIR 627
HP++Y++G ICL L + WSP V ++ SI+
Sbjct: 78 HPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 110
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +2
Query: 290 SVNSQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKF 469
S +++RL ++ L ++PP G++ G N+ LW + G T ++G F L +F
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGIS--GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 470 TNKYPFDSPEV 502
+ YP P V
Sbjct: 60 SEDYPNKPPTV 70
Score = 39.1 bits (87), Expect = 0.002
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSIR 627
HP++Y++G ICL L + WSP V ++ SI+
Sbjct: 78 HPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 110
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +2
Query: 296 NSQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTN 475
N RR+ KE L+ EP PG++ + +N+ + V + G + YEG F L+
Sbjct: 5 NLPRRIIKETQRLLSEPAPGISASPSE--ENMRYFNVMILGPTQSPYEGGVFKLELFLPE 62
Query: 476 KYPFDSPEV 502
+YP +P+V
Sbjct: 63 EYPMAAPKV 71
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSIR 627
HP++ G ICL L D WSPAL +++V LSI+
Sbjct: 79 HPNIDKLGRICLDILKDKWSPALQIRTVLLSIQ 111
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCL 618
HP++ SNG ICL L + WSPAL++ V L
Sbjct: 75 HPNINSNGSICLDILKEQWSPALTISKVTL 104
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
+ +R+ KEL L K+PP + ++++ W + G + Y G F++ F
Sbjct: 2 ASKRILKELKDLQKDPP--TSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 59
Query: 479 YPFDSPEV 502
YPF P+V
Sbjct: 60 YPFKPPKV 67
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSIR 627
HP++ G ICL L D WSPAL +++V LSI+
Sbjct: 79 HPNIDKLGRICLDILKDKWSPALQIRTVLLSIQ 111
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +2
Query: 296 NSQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTN 475
N RR+ KE L+ EP PG++ + N+ + V + G + YEG F L+
Sbjct: 5 NLPRRIIKETQRLLSEPAPGISASPSE--DNMRYFNVMILGPTQSPYEGGVFKLELFLPE 62
Query: 476 KYPFDSPEV 502
+YP +P+V
Sbjct: 63 EYPMAAPKV 71
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSIR 627
HP++ G ICL L D WSPAL +++V LSI+
Sbjct: 46 HPNIDKLGRICLDILKDKWSPALQIRTVLLSIQ 78
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +2
Query: 296 NSQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTN 475
N RR+ KE L+ EP PG++ + N+ + V + G + YEG F L+
Sbjct: 5 NLPRRIIKETQRLLSEPAPGISASPSE--DNMRYFNVMILGPTQSPYEGGVFKLELFLPE 62
Query: 476 KYPFDSPEV 502
+YP +P+V
Sbjct: 63 EYPMAAPKV 71
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCL 618
HP++ G ICL L D WSPAL +++V L
Sbjct: 79 HPNIDKLGRICLDILKDKWSPALQIRTVLL 108
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +2
Query: 374 QASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPE 499
Q S N+ WT + G GT YEG F L KF YPF P+
Sbjct: 31 QNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPK 72
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ G IC++ L D W+PAL V+ V LSI
Sbjct: 81 HPNINDEGSICMNILKDKWTPALMVEKVLLSI 112
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
+ +R+ +EL + + PP + G A +++ W + G + Y G F + F++
Sbjct: 2 ASKRISRELRDMQRHPPANCSA-GPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSD 60
Query: 479 YPFDSPEV 502
YPF P+V
Sbjct: 61 YPFKPPKV 68
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ S G ICL L + WSPA + V LSI
Sbjct: 76 HPNIDSKGSICLDILKEQWSPAPTTSKVLLSI 107
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSIR 627
HP++Y++G ICL L + WSP V +V SI+
Sbjct: 78 HPNIYADGSICLDILQNQWSPIYDVAAVLTSIQ 110
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSIR 627
HP+V SNG IC++ L DW+P+L ++ V +R
Sbjct: 84 HPNVASNGEICVNTLKKDWNPSLGLRHVLSVVR 116
Score = 34.7 bits (76), Expect = 0.053
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +2
Query: 296 NSQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTN 475
N ++L KEL SL + PP G+ V + ++ + +EG GT YE F ++ ++
Sbjct: 10 NVIKQLAKELKSLDESPPDGIKVVVN--DEDFSQICADIEGPVGTPYENGLFRMKLALSH 67
Query: 476 KYPFDSPE 499
+P P+
Sbjct: 68 DFPHSPPK 75
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 529 HPHV-YSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP+V + G ICL L + WSPA ++QSVC +I
Sbjct: 79 HPNVHFKTGEICLDILKNAWSPAWTLQSVCRAI 111
Score = 36.3 bits (80), Expect = 0.017
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +2
Query: 299 SQRRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
S+ RL KE + +E + N+ WT ++G T YEG F L F
Sbjct: 4 SRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEP 63
Query: 479 YPFDSPEV 502
YP P+V
Sbjct: 64 YPLQPPQV 71
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDD--WSPALSVQSVCLSIR 627
HP+VY +G +CLS L +D W PA++V+ + + I+
Sbjct: 84 HPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQ 118
Score = 35.5 bits (78), Expect = 0.030
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 308 RLQKELMSLMKEPPPGVTVD---GDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 478
RL +E S K P G G + NL +W + G GT +EG F L F+
Sbjct: 9 RLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSED 68
Query: 479 YPFDSPE 499
YP P+
Sbjct: 69 YPSKPPK 75
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 305 RRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 484
+RLQKE +L KEP V + ++ W +EG GT + G + + KF +YP
Sbjct: 8 KRLQKEYRALCKEPVSHVVAR--PSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYP 65
Query: 485 FDSPEV 502
+ P +
Sbjct: 66 YKPPGI 71
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 305 RRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 484
+RLQKE +L KEP V + ++ W +EG GT + G + + KF +YP
Sbjct: 8 KRLQKEYRALCKEPVSHVVAR--PSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYP 65
Query: 485 FDSPEV 502
+ P +
Sbjct: 66 YKPPGI 71
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +1
Query: 529 HPHVYS-NGHICLSXLTDDWSPALSVQSVCLSIR 627
HP++ S +G ICL L D WSPAL++++ +SI+
Sbjct: 77 HPNISSQSGAICLDILKDQWSPALTLKTALVSIQ 110
Score = 35.9 bits (79), Expect = 0.023
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 308 RLQKELMSLMK-EPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 484
R+QKEL + + G+ V S NLT T + G GT YEG F + + YP
Sbjct: 6 RIQKELQDCERNQDSSGIRVC--PKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYP 63
Query: 485 FDSPEV 502
F+ P++
Sbjct: 64 FEPPKM 69
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 35.9 bits (79), Expect = 0.023
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSV 612
HP++ G++CL+ L +DW P L++ +V
Sbjct: 104 HPNIDLEGNVCLNILREDWKPVLNINTV 131
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 35.1 bits (77), Expect = 0.040
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +2
Query: 308 RLQKELMSLMKEPPPGVTVDGDQASQN-----LTLWTV--HMEGVPGTLYEGEKFVLQFK 466
R+QKEL L+ +PP G + ++ N T T+ +EG T+Y F L+ +
Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQ 69
Query: 467 FTNKYPFDSPEV 502
+YPF P V
Sbjct: 70 IPERYPFQPPIV 81
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLT----DDWSPALSVQSVCLSIRV 630
HP++ ++G ICL L W P+L++ +V S+R+
Sbjct: 89 HPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRL 126
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 386 NLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPEV 502
N+ W+V + G P TLYEG F F YP P V
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTV 103
Score = 30.7 bits (66), Expect = 0.86
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 13/45 (28%)
Frame = +1
Query: 529 HPHVYSNGHICLSXL-------------TDDWSPALSVQSVCLSI 624
HP+VYS+G +C+S L ++ W+P +V+S+ LSI
Sbjct: 111 HPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSI 155
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 305 RRLQKELMSLMKEPPPGVTVDGDQASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 484
+R + ++M LM TV+ D L ++ V G +LY+G + ++ + YP
Sbjct: 6 KRREMDMMKLMMSDYKVDTVNDD-----LQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60
Query: 485 FDSPEV 502
+ SP V
Sbjct: 61 YKSPSV 66
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 398 WTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPEV 502
WT + G P T YEG+ F L+ +YP P V
Sbjct: 47 WTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTV 81
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 529 HPHVYSNGHICLSXLTDDWSPALSVQSVCLSI 624
HP++ G I + L WS AL++ V LSI
Sbjct: 104 HPNISEIGEIFVDILGSRWSSALTINLVLLSI 135
>At1g59660.1 68414.m06710 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 997
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -1
Query: 456 NTNFSPSYNVPGTPS 412
NTNFSPS++ P TPS
Sbjct: 436 NTNFSPSFSQPTTPS 450
>At1g03380.1 68414.m00317 expressed protein
Length = 926
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 499 SNVLGNNIPVHPHVYSNGHICLSXLTDDWSPALSVQSVCL--SIRVDA 636
++V GNNI V + S H L+ +W + + S C+ S+++DA
Sbjct: 396 ASVCGNNINVFQIMPSRSHNAPGDLSYEWDLLMCISSNCIEGSLQLDA 443
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,955,473
Number of Sequences: 28952
Number of extensions: 258540
Number of successful extensions: 662
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -