Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0482
         (629 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50740-2|CAA90608.1|  383|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AF077536-4|AAK31409.1|  726|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z82280-8|CAB05269.3|  280|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z81536-6|CAB04370.1|  352|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U50311-6|AAA92310.2|  496|Caenorhabditis elegans Cytochrome p450...    27   8.4  
U00063-3|AAK18959.2|  446|Caenorhabditis elegans Hypothetical pr...    27   8.4  

>Z50740-2|CAA90608.1|  383|Caenorhabditis elegans Hypothetical
           protein F31B12.3 protein.
          Length = 383

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 464 RVRNSINFYCFSKGKYPTKRFNIQLIIVSKTMFTVIK 354
           R+ +S+NF C   G Y    F+I  +I  K    V+K
Sbjct: 97  RIGDSLNFACVDNGHYRNVMFSINYLIDQKLFDKVVK 133


>AF077536-4|AAK31409.1|  726|Caenorhabditis elegans Hypothetical
           protein C16A11.3 protein.
          Length = 726

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = -2

Query: 595 FVSQNKFGIFFNIXPMRRELFSFVRKQSRNSKLGHKYERENMRTECGTR*IFIAFQRENI 416
           F +Q  F   F + P+++  F F  K++R  K  +  E + +R +  T    +A  REN+
Sbjct: 320 FKNQQFFSKMF-VFPLKKT-FKFQMKRTRAPKEQNPSEIKKIRRKSETDNENVAGNRENL 377

Query: 415 PLN-VLTSN 392
           P N +LTS+
Sbjct: 378 PKNPILTSS 386


>Z82280-8|CAB05269.3|  280|Caenorhabditis elegans Hypothetical
           protein R05A10.8 protein.
          Length = 280

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = -1

Query: 191 IVIIQFCTLKFGCISFFIA*ICGRTHSPPGVKWLLEPIDIYNVNAPHALRYKF 33
           +V   F  L    ++FFI  I   + +  G     E  +IYN NA H LR+K+
Sbjct: 14  VVKFLFILLSLNVVTFFI--IAKNSQNECGA----EVFNIYNANAIHELRFKY 60


>Z81536-6|CAB04370.1|  352|Caenorhabditis elegans Hypothetical
           protein F40D4.8 protein.
          Length = 352

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -3

Query: 399 HPTNNSFKNYVYS 361
           HPTN+S +NY+YS
Sbjct: 135 HPTNSSIQNYIYS 147


>U50311-6|AAA92310.2|  496|Caenorhabditis elegans Cytochrome p450
           family protein 33B1 protein.
          Length = 496

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 559 IXPMRRELFSFVRKQSRNSKLGHKYEREN 473
           I   +RELF F+RKQ   +K    YE E+
Sbjct: 237 IEEQKRELFRFLRKQIDGAKSQINYEEEH 265


>U00063-3|AAK18959.2|  446|Caenorhabditis elegans Hypothetical
           protein F56C9.3 protein.
          Length = 446

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 27  TLELISQGVWRIYVVDVYGLE*PLNTRW 110
           +++LI   V RI+   VYG++ P+N  W
Sbjct: 218 SVQLIISSVRRIHDAAVYGIKDPINVSW 245


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,637,296
Number of Sequences: 27780
Number of extensions: 232595
Number of successful extensions: 416
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)