BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesS0482 (629 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 5.7 EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.9 EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 9.9 AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 9.9 AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 9.9 AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.9 AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 9.9 AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 9.9 AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 9.9 AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 9.9 AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.9 AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.9 AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 9.9 >DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine receptor beta1subunit protein. Length = 520 Score = 21.8 bits (44), Expect = 5.7 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +1 Query: 361 TVNIVFETIISWMLKRLVGYFPFE 432 TVN++ T++ L LV Y P E Sbjct: 237 TVNLILPTVLISFLCVLVFYLPAE 260 >EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. Length = 684 Score = 21.0 bits (42), Expect = 9.9 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +3 Query: 420 FSL*KAIKIYRVPHSVRIFSRSYLCPSF 503 ++L A K VP ++ IFS S P+F Sbjct: 391 YNLEAASKYQIVPSALEIFSTSMKDPAF 418 >EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. Length = 684 Score = 21.0 bits (42), Expect = 9.9 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +3 Query: 420 FSL*KAIKIYRVPHSVRIFSRSYLCPSF 503 ++L A K VP ++ IFS S P+F Sbjct: 391 YNLEAASKYQIVPSALEIFSTSMKDPAF 418 >AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 21.0 bits (42), Expect = 9.9 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = +3 Query: 129 NLSNKKRNAPEFKSAKLYDYYFRLRQKVRQE 221 N+SN + +FK + D LR + ++E Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEE 34 >AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.0 bits (42), Expect = 9.9 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = +3 Query: 129 NLSNKKRNAPEFKSAKLYDYYFRLRQKVRQE 221 N+SN + +FK + D LR + ++E Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEE 34 >AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex determiner protein. Length = 426 Score = 21.0 bits (42), Expect = 9.9 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = +3 Query: 129 NLSNKKRNAPEFKSAKLYDYYFRLRQKVRQE 221 N+SN + +FK + D LR + ++E Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEE 34 >AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex determiner protein. Length = 396 Score = 21.0 bits (42), Expect = 9.9 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = +3 Query: 129 NLSNKKRNAPEFKSAKLYDYYFRLRQKVRQE 221 N+SN + +FK + D LR + ++E Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEE 34 >AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 21.0 bits (42), Expect = 9.9 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = +3 Query: 129 NLSNKKRNAPEFKSAKLYDYYFRLRQKVRQE 221 N+SN + +FK + D LR + ++E Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEE 34 >AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 21.0 bits (42), Expect = 9.9 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = +3 Query: 129 NLSNKKRNAPEFKSAKLYDYYFRLRQKVRQE 221 N+SN + +FK + D LR + ++E Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEE 34 >AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex determiner protein. Length = 396 Score = 21.0 bits (42), Expect = 9.9 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = +3 Query: 129 NLSNKKRNAPEFKSAKLYDYYFRLRQKVRQE 221 N+SN + +FK + D LR + ++E Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEE 34 >AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex determiner protein. Length = 413 Score = 21.0 bits (42), Expect = 9.9 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = +3 Query: 129 NLSNKKRNAPEFKSAKLYDYYFRLRQKVRQE 221 N+SN + +FK + D LR + ++E Sbjct: 4 NISNYSHHDEKFKQLRNEDSKIDLRSRTKEE 34 >AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex determiner protein. Length = 428 Score = 21.0 bits (42), Expect = 9.9 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = +3 Query: 129 NLSNKKRNAPEFKSAKLYDYYFRLRQKVRQE 221 N+SN + +FK + D LR + ++E Sbjct: 4 NISNYSHHDEKFKQLRNEDNKIDLRSRTKEE 34 >AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. Length = 429 Score = 21.0 bits (42), Expect = 9.9 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = +1 Query: 556 LC*KIFQIYFGLQNHK 603 LC K+F+ L NHK Sbjct: 406 LCHKVFRTLNSLNNHK 421 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 154,299 Number of Sequences: 438 Number of extensions: 2641 Number of successful extensions: 18 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 18 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18826962 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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