Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0479
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    26   0.25 
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    26   0.25 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.4  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   4.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   4.1  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 194 ANMGPEQQQSDKEQQHHFS 250
           A MGPEQQ  + +  HH S
Sbjct: 36  AQMGPEQQMWEPQMWHHHS 54


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 194 ANMGPEQQQSDKEQQHHFS 250
           A MGPEQQ  + +  HH S
Sbjct: 36  AQMGPEQQMWEPQMWHHHS 54


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 149 SPLALLAATCSRLGAANMGP 208
           +PLA+LAA C++L   +  P
Sbjct: 35  TPLAMLAAQCNKLSNKSPPP 54


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 207 GPMLAAPRRLQVAAN 163
           G  L+ PRR+Q+A N
Sbjct: 110 GKYLSRPRRIQIAEN 124


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 207 GPMLAAPRRLQVAAN 163
           G  L+ PRR+Q+A N
Sbjct: 101 GKYLSRPRRIQIAEN 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,657
Number of Sequences: 336
Number of extensions: 1143
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)