Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0478
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    27   0.14 
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    24   0.98 
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    24   0.98 
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    24   0.98 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   3.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   4.0  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   5.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.2  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +1

Query: 163 HANTFQRAKHILELPDSKILTLQFDKNSLTMNGTISTLQNSKRTFCRNSIIKL 321
           H N  +   +  ++ DSK+ TL    N +T    +S   + +  F  N+ I L
Sbjct: 579 HGNFIESLGNYYKIRDSKVKTLDASHNRITELSPLSVPDSVELLFINNNYINL 631


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +3

Query: 390 VHVDEFLDSDDSSKEVFQSLLDYGVAFITG-----VQPSAEATETCAK 518
           ++VDE L SD      F+ L+D G     G     V P A AT+ C K
Sbjct: 32  INVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATD-CKK 78


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +3

Query: 390 VHVDEFLDSDDSSKEVFQSLLDYGVAFITG-----VQPSAEATETCAK 518
           ++VDE L SD      F+ L+D G     G     V P A AT+ C K
Sbjct: 32  INVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATD-CKK 78


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +3

Query: 390 VHVDEFLDSDDSSKEVFQSLLDYGVAFITG-----VQPSAEATETCAK 518
           ++VDE L SD      F+ L+D G     G     V P A AT+ C K
Sbjct: 32  INVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDALATD-CKK 78


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 272 VLIVPFIVRLFLSNCNVSIFESGSSKMCLAL 180
           V +  F+VR     CN  +     S +C+AL
Sbjct: 62  VCVAVFLVRKLRRPCNYLLVSLAVSDLCVAL 92


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 172 TFQRAKHILELPDSKILTLQFDKNSLTMNGTISTLQ-NSKRTF 297
           TF+  K+++   D   +TLQ  KN++    T S++    +RTF
Sbjct: 517 TFREQKNLMIELDKFPITLQPGKNTIEQKSTKSSVTIPFERTF 559


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +2

Query: 482 ATKRGSYRNVCXALGGIQHTIFGATWEFTTV 574
           A   G ++ V    G     IFG  W F+ +
Sbjct: 41  APAEGKFKTVSKVPGPFSLPIFGTRWIFSCI 71


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 450 EAIEILPLNCRQSQETHQ 397
           EAI  L L+C Q + TH+
Sbjct: 865 EAIYQLMLDCWQKERTHR 882


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,260
Number of Sequences: 438
Number of extensions: 3245
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)