Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0476
(399 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 88 5e-17
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 84 8e-16
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 79 4e-14
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 78 7e-14
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 75 7e-13
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 73 2e-12
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 71 8e-12
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 71 8e-12
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 64 7e-10
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 64 1e-09
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 64 1e-09
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 62 5e-09
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 55 6e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 54 8e-07
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 53 2e-06
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 52 3e-06
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 49 3e-05
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 45 5e-04
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 45 5e-04
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 45 6e-04
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 45 6e-04
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 44 8e-04
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 44 0.001
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 44 0.001
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 44 0.001
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 43 0.002
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 43 0.003
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 43 0.003
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 42 0.003
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 42 0.004
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 42 0.004
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 42 0.004
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 41 0.008
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 40 0.018
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 40 0.018
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 40 0.018
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 39 0.031
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 38 0.055
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 38 0.096
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 37 0.17
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 35 0.51
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 35 0.51
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 35 0.51
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 35 0.51
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 34 0.89
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 34 0.89
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 34 1.2
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 33 1.6
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 33 1.6
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 32 3.6
UniRef50_A0V3V9 Cluster: Polysaccharide biosynthesis protein; n=... 31 6.3
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 31 6.3
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 31 6.3
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 31 8.3
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 31 8.3
UniRef50_Q20550 Cluster: Putative uncharacterized protein; n=2; ... 31 8.3
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 31 8.3
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 88.2 bits (209), Expect = 5e-17
Identities = 42/51 (82%), Positives = 43/51 (84%)
Frame = +3
Query: 246 FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
F SL D VLKIMPVQKQTRAGQRTRFKAFVAI D NGH+GLGVKCSKE
Sbjct: 96 FFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKE 146
Score = 70.1 bits (164), Expect = 1e-11
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +1
Query: 127 DQKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
+ KEW+PVTKLGRL ++ KI LE IYLFSLPIKE EIIDFFL
Sbjct: 56 EDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFL 98
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 84.2 bits (199), Expect = 8e-16
Identities = 35/47 (74%), Positives = 43/47 (91%)
Frame = +3
Query: 258 PSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
P LND V+K++PVQKQTRAGQRTRFKAFV I D++GH+GLG+KC+KE
Sbjct: 73 PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKE 119
Score = 74.1 bits (174), Expect = 9e-13
Identities = 30/46 (65%), Positives = 40/46 (86%)
Frame = +1
Query: 124 EDQKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFLAR 261
+++KEWVPVTKLGRL + GKI +E IYL+SLPIKE++I+D+FL R
Sbjct: 29 DEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFLPR 74
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 78.6 bits (185), Expect = 4e-14
Identities = 38/51 (74%), Positives = 39/51 (76%)
Frame = +3
Query: 246 FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
F SL D VLKIMPVQKQT AGQ TRFKAFV I D NGH+GL VKCSKE
Sbjct: 36 FFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKE 86
Score = 58.0 bits (134), Expect = 6e-08
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +1
Query: 142 VPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
+PVTKLG L + KI LE IYLFSLPIKE EIIDFFL
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFL 38
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 77.8 bits (183), Expect = 7e-14
Identities = 37/43 (86%), Positives = 37/43 (86%)
Frame = +3
Query: 270 DXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
D VLKIMPVQKQT AGQRTRF AFVAI D NGH GLGVKCSKE
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKE 90
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 74.5 bits (175), Expect = 7e-13
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = +3
Query: 258 PSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
P L D V+ I PVQKQTRAGQRTRFKA V + D+NGH+GLG+K +KE
Sbjct: 74 PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKE 120
Score = 62.1 bits (144), Expect = 4e-09
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +1
Query: 127 DQKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
++K WVPVTKLGRL + GKI +E I+L SLP+KEF+IID L
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL 73
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 72.9 bits (171), Expect = 2e-12
Identities = 35/44 (79%), Positives = 36/44 (81%)
Frame = +3
Query: 246 FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGL 377
F SL D VLKIMPVQKQTRAGQRTRFKAFVAI D NGH+GL
Sbjct: 71 FFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 70.9 bits (166), Expect = 8e-12
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +1
Query: 127 DQKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
+ KEW+PVTKLGRL ++ KI LE IYLFSLPIKE EIIDFFL
Sbjct: 31 EDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFL 73
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 70.9 bits (166), Expect = 8e-12
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +1
Query: 127 DQKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
+ KEW+PVTKLGRL ++ KI LE IYLFSLPIKE EIIDFFL
Sbjct: 56 EDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFL 98
Score = 49.6 bits (113), Expect = 2e-05
Identities = 24/30 (80%), Positives = 24/30 (80%)
Frame = +3
Query: 246 FLPXPSLNDXVLKIMPVQKQTRAGQRTRFK 335
F SL D VLKIMPVQKQTRAGQRTRFK
Sbjct: 96 FFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 70.9 bits (166), Expect = 8e-12
Identities = 39/70 (55%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Frame = +3
Query: 198 EHLLVF---FTNQRIRDH*FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGH 368
EH+ +F +I +H F+ L D V+KI PVQKQT AGQR RFKAFV + D NGH
Sbjct: 69 EHIFLFSLPIKEHQIVEH-FIGG-ELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGH 126
Query: 369 IGLGVKCSKE 398
IGLGVK KE
Sbjct: 127 IGLGVKACKE 136
Score = 61.7 bits (143), Expect = 5e-09
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = +1
Query: 124 EDQKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
+D+ WVP TKLGRL ++GKI LE I+LFSLPIKE +I++ F+
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFI 88
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 64.5 bits (150), Expect = 7e-10
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +3
Query: 246 FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIG 374
F SL D VLKIMPV+K+TRAGQRTRFKAFVAI D NG+ G
Sbjct: 24 FFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 44.4 bits (100), Expect = 8e-04
Identities = 21/25 (84%), Positives = 21/25 (84%)
Frame = +1
Query: 181 KIDKLESIYLFSLPIKEFEIIDFFL 255
KI LE IYLFSLPIKE EIIDFFL
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFL 26
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 64.1 bits (149), Expect = 1e-09
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +1
Query: 127 DQKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
+ KEW+P TKLG L ++ KI LE IYLFSLPIK EIIDFFL
Sbjct: 56 EDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFL 98
Score = 42.3 bits (95), Expect = 0.003
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = +3
Query: 246 FLPXPSLNDXVLKIMPVQKQTRAGQRTRFK 335
F SL + VLK MPVQKQTRAGQ TRFK
Sbjct: 96 FFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 63.7 bits (148), Expect = 1e-09
Identities = 26/42 (61%), Positives = 36/42 (85%)
Frame = +1
Query: 130 QKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
++EWVP+TKLGRL + GKI LE+I+ FS+PIKE++I+D FL
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL 102
Score = 58.0 bits (134), Expect = 6e-08
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = +3
Query: 228 RIRDH*FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
+I DH FL +L + L I PVQKQT AGQ+TRFKA+V + D++ HIGLG K +KE
Sbjct: 96 QIVDH-FLK--TLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKE 149
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 61.7 bits (143), Expect = 5e-09
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = +3
Query: 261 SLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
S+ + VL I VQKQTRAGQ+TR KA V + D GH+G+G K SKE
Sbjct: 62 SIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKE 107
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1
Query: 124 EDQKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIID 246
+++ EW+P T +GRL + KI LE I+ FS I+E EI+D
Sbjct: 16 KEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVD 56
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 54.8 bits (126), Expect = 6e-07
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +1
Query: 127 DQKEWVPVTKLGRLXREGKIDKLESIYLFSLPIK 228
+ KEW+PVTKLGRL ++ KI LE IYLFSLPIK
Sbjct: 56 EDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 54.4 bits (125), Expect = 8e-07
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +1
Query: 139 WVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFF 252
W PVTKLGRL ++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 52.8 bits (121), Expect = 2e-06
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +3
Query: 297 QKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
QKQT+ GQ+ R K F D NGH+GLG+KCSKE
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKE 34
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 52.4 bits (120), Expect = 3e-06
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +3
Query: 246 FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
FL L D VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE
Sbjct: 157 FLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKE 207
Score = 37.1 bits (82), Expect = 0.13
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 202 IYLFSLPIKEFEIIDFFLARP 264
+YLFSLPIKEFE+ DF L P
Sbjct: 142 VYLFSLPIKEFEVTDFLLGVP 162
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 49.2 bits (112), Expect = 3e-05
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +1
Query: 145 PVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFLAR 261
PVTKLGRL ++GK+ ++ I+ F + IKE++I+D L+R
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLSR 74
Score = 39.9 bits (89), Expect = 0.018
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3
Query: 264 LNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGL 377
L + V+ I VQKQT G+ R KA VAI D+NGH L
Sbjct: 75 LKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 45.2 bits (102), Expect = 5e-04
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = -2
Query: 398 FLAALXTQTNMTVVVANGNKCLETCALSGTCLFLYRHDLKNXIIQGRARKK 246
FLAAL QT++ V V +G++ LE L+GT L L HDL++ ++Q A+++
Sbjct: 56 FLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLLDGHDLQHFVLQRAAQEE 106
Score = 37.1 bits (82), Expect = 0.13
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -1
Query: 252 EEINDLEFFDW*RKQVNALEFVDFSFAXKTAEFGXRNPLFLVF 124
EEI+DLE F+ R QV+ L+ D + A + + G NP VF
Sbjct: 105 EEIDDLELFNGQRVQVDLLQGADLAIAHQATQLGHWNPFLRVF 147
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 45.2 bits (102), Expect = 5e-04
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +3
Query: 258 PSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
P L V+ + +QK T GQ TRFKA VA + NG++G+G SK+
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQ 131
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 44.8 bits (101), Expect = 6e-04
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +3
Query: 321 RTRFKAFVAIXDNNGHIGLGVKCSKE 398
+ RFKAFVAI D+NG +G GVKCSKE
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKE 86
Score = 31.5 bits (68), Expect = 6.3
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 127 DQKEWVPVTKLGRLXREGKI 186
+ KEW+PVT LGRL ++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 44.8 bits (101), Expect = 6e-04
Identities = 18/47 (38%), Positives = 32/47 (68%)
Frame = +3
Query: 258 PSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
P L + VL + VQ+ ++G+R R++A V + + NG++G+G+ SKE
Sbjct: 55 PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKE 101
Score = 35.1 bits (77), Expect = 0.51
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 139 WVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
W P T++GR+ +EG I + I LP+ E EI+D L
Sbjct: 16 WEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL 54
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 44.4 bits (100), Expect = 8e-04
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 279 LKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGV 383
++I +K+T AGQ+TRFKAFV D NGH+ L V
Sbjct: 13 IRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSLEV 47
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 44.0 bits (99), Expect = 0.001
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1
Query: 145 PVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
P +KLG L ++ +I L IYLFSLPIKE EIID FL
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFL 86
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 43.6 bits (98), Expect = 0.001
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +3
Query: 246 FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
F SL D VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+
Sbjct: 28 FFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKK 76
Score = 33.5 bits (73), Expect = 1.6
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 142 VPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
+PVTKLG L ++ KI L P+KEFEI DFFL
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFL 30
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 43.6 bits (98), Expect = 0.001
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3
Query: 258 PSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
P L V+ + +QK T GQ TRFKA VA + NG++G+G +K+
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQ 112
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 43.2 bits (97), Expect = 0.002
Identities = 24/42 (57%), Positives = 27/42 (64%)
Frame = -2
Query: 251 KKSMISNSLIGKENK*MLSSLSIFPSRXRRPSLVTGTHSFWS 126
K SMI NSL GKE K + S + I P+ PSLVTGTH F S
Sbjct: 12 KVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 42.7 bits (96), Expect = 0.003
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = +3
Query: 246 FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
FL L D VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE
Sbjct: 23 FLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKE 73
Score = 35.1 bits (77), Expect = 0.51
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +1
Query: 181 KIDKLESIYLFSLPIKEFEIIDFFLARP 264
KI L+ +YLFS PIKEFE+ DF L P
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVP 28
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 42.7 bits (96), Expect = 0.003
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1
Query: 133 KEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
+EW P TKLGRL +EGKI ++ I I+E EI+D L
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL 45
Score = 34.7 bits (76), Expect = 0.67
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 297 QKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
QK+T G +TR++ + D +GH+G+G+ S +
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSD 105
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 42.3 bits (95), Expect = 0.003
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +1
Query: 133 KEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFLAR 261
+EW P T +G L +EGKI ++ ++ +LPI E EI+D L +
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLLPK 53
Score = 37.1 bits (82), Expect = 0.13
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 258 PSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
P L V+ I VQKQT AG+ +R+K V + + +G++ +G +K+
Sbjct: 52 PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQ 98
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 41.9 bits (94), Expect = 0.004
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 130 QKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFLARP 264
+ +W+P+TKLG L +E KI LE IY FSL + + F P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
Score = 36.3 bits (80), Expect = 0.22
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 291 PVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
P+ KQT Q+TRFKA V + + GH+ LG+K S E
Sbjct: 95 PLIKQTCTDQQTRFKASVTV-GSYGHVSLGIKYSME 129
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 41.9 bits (94), Expect = 0.004
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 258 PSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
P + VL++ + K + G+ F+A VA+ D NG IGLG +KE
Sbjct: 69 PRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKE 115
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 41.9 bits (94), Expect = 0.004
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 133 KEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
+EW P T+LGRL G+I + LP+KE++I+D+ +
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI 43
Score = 36.3 bits (80), Expect = 0.22
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 258 PSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
P L D V+ I Q+ T +G+R + + + NG++G+G +KE
Sbjct: 44 PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKE 90
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 41.1 bits (92), Expect = 0.008
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 258 PSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
P L+D VL + +Q+ T +G+R RF + +++G++GL + KE
Sbjct: 31 PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKE 77
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 39.9 bits (89), Expect = 0.018
Identities = 21/63 (33%), Positives = 38/63 (60%)
Frame = +3
Query: 210 VFFTNQRIRDH*FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKC 389
+FF N ++ + L SL V++ + V + T++G++ + K V + D +GH+GLGVK
Sbjct: 92 IFFHNNKLVN--ILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 390 SKE 398
S +
Sbjct: 150 SMD 152
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 39.9 bits (89), Expect = 0.018
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +1
Query: 136 EWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
EW P TKLG + +EG+I + I+ IKE EIID L
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL 54
Score = 37.9 bits (84), Expect = 0.072
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 267 NDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
N VL I + T +G+R RF+ A+ + +G++GLG+ KE
Sbjct: 62 NQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKE 105
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 39.9 bits (89), Expect = 0.018
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 264 LNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
L + V+ + V K + G+R RF A V + D NGH+G G ++E
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQE 56
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 39.1 bits (87), Expect = 0.031
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 261 SLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
+ + V+KI + K T+ G+ RF A V I D NG +G G+ S E
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIE 93
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 38.3 bits (85), Expect = 0.055
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 270 DXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGV 383
+ ++KI V K T+ G++ F+A V I D NG +G+GV
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGV 65
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 37.5 bits (83), Expect = 0.096
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 139 WVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIID 246
W P T+LG+ EG+ID ++ LP+KE E++D
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVD 42
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 36.7 bits (81), Expect = 0.17
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 139 WVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
W P T+LGR + G I +E LP+KE EI+D L
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL 96
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 35.1 bits (77), Expect = 0.51
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 270 DXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
+ V+++ V K + G++ F+A V + D G +G+GV +KE
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKE 228
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 35.1 bits (77), Expect = 0.51
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 270 DXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGV 383
+ V++I V K + G++ F+A + + D NG +G+GV
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGV 105
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 35.1 bits (77), Expect = 0.51
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 270 DXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
+ +L + K + G+R RF A V + D NG +G+G+ +KE
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKE 61
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 35.1 bits (77), Expect = 0.51
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +3
Query: 270 DXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
+ V+++ V K + G++ +F+A V + D G++G+G +KE
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKE 191
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 34.3 bits (75), Expect = 0.89
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2
Query: 398 FLAALXTQTNMTVVVANGNKCLET 327
FL T+TNMT+ V+N NKC ET
Sbjct: 34 FLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 34.3 bits (75), Expect = 0.89
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 270 DXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGV 383
+ +LKI V K T+ G+ F A+ D G IGLG+
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGL 48
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 33.9 bits (74), Expect = 1.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 270 DXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
+ V+ I V K + G+R F A V + D NG +G+G +KE
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKE 86
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 33.5 bits (73), Expect = 1.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 264 LNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
L D V+ I V K + G+ F A V + D NG +G+G S+E
Sbjct: 45 LLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSRE 89
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 33.5 bits (73), Expect = 1.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 249 LPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
LP L + ++ + T+ G+R F V + D GH+G G +KE
Sbjct: 23 LPELQLEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKE 72
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 32.3 bits (70), Expect = 3.6
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 270 DXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGV 383
+ V++I V K + G++ F+A V + + G +G+GV
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGV 56
>UniRef50_A0V3V9 Cluster: Polysaccharide biosynthesis protein; n=2;
Clostridium|Rep: Polysaccharide biosynthesis protein -
Clostridium cellulolyticum H10
Length = 522
Score = 31.5 bits (68), Expect = 6.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -2
Query: 320 LSGTCLFLYRHDLKNXIIQGRARKKSMISNSLIG 219
LS TC+F+Y + I+ G ++ +++NS+IG
Sbjct: 362 LSFTCIFIYLQQILTGIMNGLGKQGLLLTNSIIG 395
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 31.5 bits (68), Expect = 6.3
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +3
Query: 270 DXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
+ +++I K T+ G+ F+ + + NG +GLG+ ++E
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKARE 59
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 31.5 bits (68), Expect = 6.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 264 LNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGV 383
L + ++ I V K + G+R F A V + D NG +G G+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGL 55
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 31.1 bits (67), Expect = 8.3
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 252 PXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLG 380
P L + V+ I K + G+R F A + D NG +G+G
Sbjct: 67 PDSGLVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIG 109
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 31.1 bits (67), Expect = 8.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 335 LETCALSGTCLFLYRHDLKNXII 267
LE+CAL TC+ +Y HD+ ++
Sbjct: 965 LESCALDDTCVIVYEHDMNRVML 987
>UniRef50_Q20550 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 801
Score = 31.1 bits (67), Expect = 8.3
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 344 NKCLETCALSGTCLFLYR-HDLKNXIIQGRARKKSMISNSLIGKEN 210
++CLE C +S C F Y+ D+ N +I R M++ + N
Sbjct: 286 SECLEKCTMSEECRFAYQSKDMNNCLISRRRMALPMLAQKICADVN 331
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 31.1 bits (67), Expect = 8.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 294 VQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
V QT G+ F A V + D NG +GLG S+E
Sbjct: 154 VSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSRE 188
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,214,044
Number of Sequences: 1657284
Number of extensions: 4273514
Number of successful extensions: 9595
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 9370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9592
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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