Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0476
         (399 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml prot...    92   3e-19
U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal prot...    92   3e-19
U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal prot...    92   3e-19
AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p pro...    92   3e-19
AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA...    92   3e-19

>X69120-1|CAA48872.1|  267|Drosophila melanogaster ribosoaml protein
           S2 protein.
          Length = 267

 Score = 91.9 bits (218), Expect = 3e-19
 Identities = 44/51 (86%), Positives = 44/51 (86%)
 Frame = +3

Query: 246 FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
           F    SL D VLKIMPVQKQTRAGQRTRFKAFVAI DNNGHIGLGVKCSKE
Sbjct: 79  FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 129



 Score = 83.0 bits (196), Expect = 1e-16
 Identities = 38/44 (86%), Positives = 39/44 (88%)
 Frame = +1

Query: 124 EDQKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
           ED KEWVPVTKLGRL REGKI  LE IYL+SLPIKEFEIIDFFL
Sbjct: 38  EDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFL 81


>U01335-1|AAA87053.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score = 91.9 bits (218), Expect = 3e-19
 Identities = 44/51 (86%), Positives = 44/51 (86%)
 Frame = +3

Query: 246 FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
           F    SL D VLKIMPVQKQTRAGQRTRFKAFVAI DNNGHIGLGVKCSKE
Sbjct: 79  FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 129



 Score = 83.0 bits (196), Expect = 1e-16
 Identities = 38/44 (86%), Positives = 39/44 (88%)
 Frame = +1

Query: 124 EDQKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
           ED KEWVPVTKLGRL REGKI  LE IYL+SLPIKEFEIIDFFL
Sbjct: 38  EDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFL 81


>U01334-1|AAC34198.1|  267|Drosophila melanogaster ribosomal protein
           S2 protein.
          Length = 267

 Score = 91.9 bits (218), Expect = 3e-19
 Identities = 44/51 (86%), Positives = 44/51 (86%)
 Frame = +3

Query: 246 FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
           F    SL D VLKIMPVQKQTRAGQRTRFKAFVAI DNNGHIGLGVKCSKE
Sbjct: 79  FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 129



 Score = 83.0 bits (196), Expect = 1e-16
 Identities = 38/44 (86%), Positives = 39/44 (88%)
 Frame = +1

Query: 124 EDQKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
           ED KEWVPVTKLGRL REGKI  LE IYL+SLPIKEFEIIDFFL
Sbjct: 38  EDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFL 81


>AY094799-1|AAM11152.1|  267|Drosophila melanogaster LD24077p
           protein.
          Length = 267

 Score = 91.9 bits (218), Expect = 3e-19
 Identities = 44/51 (86%), Positives = 44/51 (86%)
 Frame = +3

Query: 246 FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
           F    SL D VLKIMPVQKQTRAGQRTRFKAFVAI DNNGHIGLGVKCSKE
Sbjct: 79  FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 129



 Score = 83.0 bits (196), Expect = 1e-16
 Identities = 38/44 (86%), Positives = 39/44 (88%)
 Frame = +1

Query: 124 EDQKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
           ED KEWVPVTKLGRL REGKI  LE IYL+SLPIKEFEIIDFFL
Sbjct: 38  EDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFL 81


>AE014134-1713|AAF52822.1|  267|Drosophila melanogaster CG5920-PA
           protein.
          Length = 267

 Score = 91.9 bits (218), Expect = 3e-19
 Identities = 44/51 (86%), Positives = 44/51 (86%)
 Frame = +3

Query: 246 FLPXPSLNDXVLKIMPVQKQTRAGQRTRFKAFVAIXDNNGHIGLGVKCSKE 398
           F    SL D VLKIMPVQKQTRAGQRTRFKAFVAI DNNGHIGLGVKCSKE
Sbjct: 79  FFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 129



 Score = 83.0 bits (196), Expect = 1e-16
 Identities = 38/44 (86%), Positives = 39/44 (88%)
 Frame = +1

Query: 124 EDQKEWVPVTKLGRLXREGKIDKLESIYLFSLPIKEFEIIDFFL 255
           ED KEWVPVTKLGRL REGKI  LE IYL+SLPIKEFEIIDFFL
Sbjct: 38  EDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFL 81


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,994,559
Number of Sequences: 53049
Number of extensions: 210482
Number of successful extensions: 395
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)