Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0475
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    29   0.023
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   2.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.5  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   7.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   7.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 29.5 bits (63), Expect = 0.023
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
 Frame = -2

Query: 465 CANGC-GYDCASNYDGGXETWTCACDRNDSCMAMRGDHIAPSEREVPCRPTFVRPSCPGL 289
           C +G  GY C  N D   +    AC  N +C+   G        E  C P FV P C G 
Sbjct: 248 CPSGTLGYICEINVD---DCRPGACHNNGTCLDKVGGF------ECKCPPGFVGPRCEGD 298

Query: 288 LQRHDARKTSRSESSTFPCVPI 223
           +  ++      S + T  CV +
Sbjct: 299 I--NECLSNPCSNAGTLDCVQL 318


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = -2

Query: 546 FQCLDRE-RERLCDGNVPWNSLSQSESDCANGCGYDCAS 433
           ++C D +  E+LC   + +N  S     C      DC S
Sbjct: 56  YECNDGQITEKLCPDGMVFNDYSSEYEKCDLPFNIDCTS 94


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 343 RWRDMVAPHRHTGVV 387
           RWRD +    H+GVV
Sbjct: 310 RWRDRIYDAIHSGVV 324


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 522 LAHDPDTEMSLWCESVP 572
           LA+D +  + +W + VP
Sbjct: 128 LAYDREARVCMWADQVP 144


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 522 LAHDPDTEMSLWCESVP 572
           LA+D +  + +W + VP
Sbjct: 128 LAYDREARVCMWADQVP 144


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -1

Query: 259 TKRILYFPLCTDLWECRYHQLLRTFRKRGVSLQAS 155
           T    +F +C D        ++  FRKR V+ + S
Sbjct: 72  THIFFFFAICCDFIALIVVNIVHVFRKRRVNYKDS 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,577
Number of Sequences: 336
Number of extensions: 2382
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)