Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0474
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   6.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.4  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   8.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.4  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 94  HPRRYVSEFNISS 132
           HP R+  +FNISS
Sbjct: 101 HPHRFRLKFNISS 113


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +3

Query: 279 CKIGMNGFFSLFMFCRHGRHICFLFFIVINFXSLFCHL*INKSKLIIQSTLIHN 440
           C    N F+S   F      I FLFFI+     L  +  I K+ +   +TL+ N
Sbjct: 225 CHTLANTFWSALYFLT----IIFLFFIIPLIILLILYCIIAKNLMSNAATLVLN 274


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 82  CHRRHPRRYVSEFNISSCS 138
           C RRH +  +   ++S+CS
Sbjct: 65  CERRHIKGAIPVVSLSTCS 83


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 512 LNRHLKIVGASS 547
           LNRH+++ GA+S
Sbjct: 121 LNRHMRVHGAAS 132


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 512 LNRHLKIVGASS 547
           LNRH+++ GA+S
Sbjct: 377 LNRHMRVHGAAS 388


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,468
Number of Sequences: 336
Number of extensions: 1998
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)