Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0472
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VUM7 Cluster: CG12327-PA; n=2; Sophophora|Rep: CG1232...    33   6.7  
UniRef50_Q7KWP2 Cluster: Putative uncharacterized protein; n=3; ...    32   8.9  

>UniRef50_Q9VUM7 Cluster: CG12327-PA; n=2; Sophophora|Rep:
           CG12327-PA - Drosophila melanogaster (Fruit fly)
          Length = 535

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = -3

Query: 305 RFIYVDKLSIFSCFYYVLVS*KWELGDLD*QNYGY*VSHCSDLL*VQPNSFDL 147
           + I+VD L+  SCFY++ V  ++ L D+D   +   V +C     + P SF L
Sbjct: 31  KIIWVDLLAFLSCFYFMAVIYRYALRDVDKPVFEDIVMYCHSYSNLIPLSFVL 83


>UniRef50_Q7KWP2 Cluster: Putative uncharacterized protein; n=3;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum (Slime mold)
          Length = 1485

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = -1

Query: 346 FSXGWLSCSCTIIGGS--FMWINCLFSPVSTTYLSLESGNW-GIWI 218
           +  G L+ SC   G S  + W  C  +P  TT +S   G W G+W+
Sbjct: 818 YCDGKLTSSCWDNGKSLHYQWDGCTLTPSPTTQVSYGRGRWNGVWL 863


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,804,746
Number of Sequences: 1657284
Number of extensions: 7362784
Number of successful extensions: 13888
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13886
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)